Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK9P50750 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDK9P50750 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.54■■□□□ 1.04
CDK9P50750 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK9P50750 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK9P50750 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.54■■□□□ 1.04
CDK9P50750 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK9P50750 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK9P50750 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.53■■□□□ 1.04
CDK9P50750 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.53■■□□□ 1.04
CDK9P50750 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CDK9P50750 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 AF131216.4-201ENST00000638924 1588 ntBASIC21.53■■□□□ 1.04
CDK9P50750 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.52■■□□□ 1.04
CDK9P50750 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.52■■□□□ 1.04
CDK9P50750 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 AC009299.2-201ENST00000482477 511 ntBASIC21.52■■□□□ 1.04
CDK9P50750 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.52■■□□□ 1.04
CDK9P50750 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 AC137767.1-201ENST00000602918 1920 ntBASIC21.52■■□□□ 1.04
CDK9P50750 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDK9P50750 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK9P50750 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK9P50750 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDK9P50750 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK9P50750 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK9P50750 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK9P50750 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK9P50750 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK9P50750 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK9P50750 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.5■■□□□ 1.03
CDK9P50750 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.5■■□□□ 1.03
CDK9P50750 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDK9P50750 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK9P50750 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK9P50750 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDK9P50750 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDK9P50750 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK9P50750 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK9P50750 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK9P50750 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.49■■□□□ 1.03
CDK9P50750 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.49■■□□□ 1.03
CDK9P50750 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.49■■□□□ 1.03
CDK9P50750 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK9P50750 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK9P50750 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK9P50750 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK9P50750 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK9P50750 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK9P50750 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.48■■□□□ 1.03
CDK9P50750 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDK9P50750 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 SLC25A24-204ENST00000569674 2357 ntBASIC21.47■■□□□ 1.03
CDK9P50750 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK9P50750 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK9P50750 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.47■■□□□ 1.03
CDK9P50750 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDK9P50750 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CDK9P50750 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK9P50750 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK9P50750 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK9P50750 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK9P50750 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.46■■□□□ 1.03
CDK9P50750 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.46■■□□□ 1.03
CDK9P50750 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.46■■□□□ 1.03
CDK9P50750 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.46■■□□□ 1.03
CDK9P50750 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDK9P50750 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.45■■□□□ 1.02
CDK9P50750 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms