Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK9P50750 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDK9P50750 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.54■■□□□ 1.04
CDK9P50750 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK9P50750 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK9P50750 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.54■■□□□ 1.04
CDK9P50750 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK9P50750 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK9P50750 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.53■■□□□ 1.04
CDK9P50750 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.53■■□□□ 1.04
CDK9P50750 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CDK9P50750 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK9P50750 AF131216.4-201ENST00000638924 1588 ntBASIC21.53■■□□□ 1.04
CDK9P50750 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.52■■□□□ 1.04
CDK9P50750 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.52■■□□□ 1.04
CDK9P50750 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 AC009299.2-201ENST00000482477 511 ntBASIC21.52■■□□□ 1.04
CDK9P50750 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.52■■□□□ 1.04
CDK9P50750 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 AC137767.1-201ENST00000602918 1920 ntBASIC21.52■■□□□ 1.04
CDK9P50750 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK9P50750 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDK9P50750 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK9P50750 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK9P50750 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDK9P50750 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK9P50750 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK9P50750 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK9P50750 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK9P50750 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK9P50750 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK9P50750 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.5■■□□□ 1.03
CDK9P50750 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.5■■□□□ 1.03
CDK9P50750 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDK9P50750 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK9P50750 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK9P50750 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDK9P50750 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDK9P50750 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK9P50750 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK9P50750 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK9P50750 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.49■■□□□ 1.03
CDK9P50750 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.49■■□□□ 1.03
CDK9P50750 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.49■■□□□ 1.03
CDK9P50750 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK9P50750 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK9P50750 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK9P50750 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK9P50750 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK9P50750 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK9P50750 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.48■■□□□ 1.03
CDK9P50750 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK9P50750 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDK9P50750 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 SLC25A24-204ENST00000569674 2357 ntBASIC21.47■■□□□ 1.03
CDK9P50750 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK9P50750 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK9P50750 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.47■■□□□ 1.03
CDK9P50750 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDK9P50750 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CDK9P50750 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK9P50750 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK9P50750 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK9P50750 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK9P50750 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK9P50750 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.46■■□□□ 1.03
CDK9P50750 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.46■■□□□ 1.03
CDK9P50750 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.46■■□□□ 1.03
CDK9P50750 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.46■■□□□ 1.03
CDK9P50750 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDK9P50750 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.45■■□□□ 1.02
CDK9P50750 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDK9P50750 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms