Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.5■□□□□ 0.71
GDNFP39905 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GDNFP39905 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDNFP39905 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDNFP39905 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
GDNFP39905 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.5■□□□□ 0.71
GDNFP39905 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GDNFP39905 MIR6765-201ENST00000614092 87 ntBASIC19.5■□□□□ 0.71
GDNFP39905 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GDNFP39905 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.5■□□□□ 0.71
GDNFP39905 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDNFP39905 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.5■□□□□ 0.71
GDNFP39905 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GDNFP39905 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.5■□□□□ 0.71
GDNFP39905 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GDNFP39905 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
GDNFP39905 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
GDNFP39905 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.49■□□□□ 0.71
GDNFP39905 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GDNFP39905 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.49■□□□□ 0.71
GDNFP39905 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.49■□□□□ 0.71
GDNFP39905 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.49■□□□□ 0.71
GDNFP39905 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GDNFP39905 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
GDNFP39905 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
GDNFP39905 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GDNFP39905 AC242852.2-201ENST00000615738 1807 ntBASIC19.48■□□□□ 0.71
GDNFP39905 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GDNFP39905 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
GDNFP39905 RPS2P7-201ENST00000447334 885 ntBASIC19.48■□□□□ 0.71
GDNFP39905 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.48■□□□□ 0.71
GDNFP39905 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.48■□□□□ 0.71
GDNFP39905 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
GDNFP39905 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
GDNFP39905 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GDNFP39905 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
GDNFP39905 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.48■□□□□ 0.71
GDNFP39905 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
GDNFP39905 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GDNFP39905 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDNFP39905 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDNFP39905 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GDNFP39905 DUX4L18-201ENST00000553347 1267 ntBASIC19.47■□□□□ 0.71
GDNFP39905 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GDNFP39905 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.47■□□□□ 0.71
GDNFP39905 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDNFP39905 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDNFP39905 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GDNFP39905 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.46■□□□□ 0.71
GDNFP39905 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GDNFP39905 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.46■□□□□ 0.71
GDNFP39905 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.46■□□□□ 0.71
GDNFP39905 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.46■□□□□ 0.71
GDNFP39905 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GDNFP39905 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDNFP39905 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDNFP39905 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDNFP39905 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDNFP39905 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GDNFP39905 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.45■□□□□ 0.7
GDNFP39905 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
GDNFP39905 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GDNFP39905 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GDNFP39905 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.45■□□□□ 0.7
GDNFP39905 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
GDNFP39905 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.44■□□□□ 0.7
GDNFP39905 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.44■□□□□ 0.7
GDNFP39905 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GDNFP39905 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GDNFP39905 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
GDNFP39905 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GDNFP39905 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.43■□□□□ 0.7
GDNFP39905 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.43■□□□□ 0.7
GDNFP39905 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.43■□□□□ 0.7
GDNFP39905 KRT18P10-201ENST00000388836 1287 ntBASIC19.43■□□□□ 0.7
GDNFP39905 AC004987.1-201ENST00000428627 508 ntBASIC19.43■□□□□ 0.7
GDNFP39905 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.43■□□□□ 0.7
GDNFP39905 AC087393.1-201ENST00000582896 145 ntBASIC19.43■□□□□ 0.7
GDNFP39905 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.43■□□□□ 0.7
GDNFP39905 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDNFP39905 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDNFP39905 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GDNFP39905 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms