Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SCNN1AP37088 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.51■■□□□ 1.35
SCNN1AP37088 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SCNN1AP37088 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.51■■□□□ 1.35
SCNN1AP37088 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCNN1AP37088 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCNN1AP37088 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.51■■□□□ 1.35
SCNN1AP37088 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.51■■□□□ 1.35
SCNN1AP37088 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCNN1AP37088 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.5■■□□□ 1.35
SCNN1AP37088 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCNN1AP37088 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCNN1AP37088 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.5■■□□□ 1.35
SCNN1AP37088 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
SCNN1AP37088 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.5■■□□□ 1.35
SCNN1AP37088 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCNN1AP37088 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCNN1AP37088 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCNN1AP37088 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
SCNN1AP37088 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.5■■□□□ 1.35
SCNN1AP37088 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCNN1AP37088 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCNN1AP37088 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
SCNN1AP37088 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCNN1AP37088 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.49■■□□□ 1.35
SCNN1AP37088 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCNN1AP37088 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCNN1AP37088 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCNN1AP37088 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.49■■□□□ 1.35
SCNN1AP37088 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SCNN1AP37088 AL512631.2-201ENST00000604634 923 ntBASIC23.49■■□□□ 1.35
SCNN1AP37088 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCNN1AP37088 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCNN1AP37088 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.49■■□□□ 1.35
SCNN1AP37088 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCNN1AP37088 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCNN1AP37088 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCNN1AP37088 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCNN1AP37088 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SCNN1AP37088 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.48■■□□□ 1.35
SCNN1AP37088 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SCNN1AP37088 DUX4L4-201ENST00000566884 1269 ntBASIC23.48■■□□□ 1.35
SCNN1AP37088 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCNN1AP37088 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.48■■□□□ 1.35
SCNN1AP37088 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.48■■□□□ 1.35
SCNN1AP37088 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCNN1AP37088 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SCNN1AP37088 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.48■■□□□ 1.35
SCNN1AP37088 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.48■■□□□ 1.35
SCNN1AP37088 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.47■■□□□ 1.35
SCNN1AP37088 LINC01529-204ENST00000636474 1715 ntBASIC23.47■■□□□ 1.35
SCNN1AP37088 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCNN1AP37088 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.47■■□□□ 1.35
SCNN1AP37088 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.47■■□□□ 1.35
SCNN1AP37088 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.47■■□□□ 1.35
SCNN1AP37088 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.47■■□□□ 1.35
SCNN1AP37088 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.47■■□□□ 1.35
SCNN1AP37088 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SCNN1AP37088 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SCNN1AP37088 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.46■■□□□ 1.35
SCNN1AP37088 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.46■■□□□ 1.35
SCNN1AP37088 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
SCNN1AP37088 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SCNN1AP37088 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.46■■□□□ 1.35
SCNN1AP37088 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.35
SCNN1AP37088 AL353803.4-201ENST00000565882 1934 ntBASIC23.45■■□□□ 1.35
SCNN1AP37088 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
SCNN1AP37088 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SCNN1AP37088 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SCNN1AP37088 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.45■■□□□ 1.34
SCNN1AP37088 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SCNN1AP37088 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SCNN1AP37088 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
SCNN1AP37088 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.45■■□□□ 1.34
SCNN1AP37088 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
SCNN1AP37088 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SCNN1AP37088 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
SCNN1AP37088 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.44■■□□□ 1.34
SCNN1AP37088 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
SCNN1AP37088 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.44■■□□□ 1.34
SCNN1AP37088 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.44■■□□□ 1.34
SCNN1AP37088 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.44■■□□□ 1.34
SCNN1AP37088 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.44■■□□□ 1.34
SCNN1AP37088 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.44■■□□□ 1.34
SCNN1AP37088 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
SCNN1AP37088 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SCNN1AP37088 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.44■■□□□ 1.34
SCNN1AP37088 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.44■■□□□ 1.34
SCNN1AP37088 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.44■■□□□ 1.34
SCNN1AP37088 AC241377.3-202ENST00000626088 1088 ntBASIC23.44■■□□□ 1.34
SCNN1AP37088 AC241585.3-202ENST00000628937 1088 ntBASIC23.44■■□□□ 1.34
SCNN1AP37088 AC245100.8-202ENST00000629247 1058 ntBASIC23.44■■□□□ 1.34
SCNN1AP37088 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SCNN1AP37088 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.44■■□□□ 1.34
SCNN1AP37088 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SCNN1AP37088 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.43■■□□□ 1.34
SCNN1AP37088 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
SCNN1AP37088 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.43■■□□□ 1.34
SCNN1AP37088 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SCNN1AP37088 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms