Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC13.08□□□□□ -0.322e-6■■□□□ 13.5
SFPQP23246 TFEB-216ENST00000445700 223 ntTSL 1 (best)12.99□□□□□ -0.332e-6■■□□□ 13.5
SFPQP23246 KIF2A-201ENST00000381103 3360 ntTSL 1 (best) BASIC12.42□□□□□ -0.422e-6■■□□□ 13.5
SFPQP23246 UBAP2L-207ENST00000428931 3988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.462e-6■■□□□ 13.5
SFPQP23246 UBAP2L-201ENST00000271877 3997 ntTSL 5 BASIC11.69□□□□□ -0.542e-6■■□□□ 13.5
SFPQP23246 DAPK1-212ENST00000489291 4334 ntTSL 1 (best)11.21□□□□□ -0.612e-6■■□□□ 13.5
SFPQP23246 CYB5A-207ENST00000583418 5913 ntTSL 210.43□□□□□ -0.742e-6■■□□□ 13.5
SFPQP23246 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC10.41□□□□□ -0.742e-6■■□□□ 13.5
SFPQP23246 SOX5-209ENST00000536911 855 ntTSL 310.17□□□□□ -0.782e-6■■□□□ 13.5
SFPQP23246 KIF2A-204ENST00000504883 783 ntTSL 210.09□□□□□ -0.792e-6■■□□□ 13.5
SFPQP23246 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC9.88□□□□□ -0.832e-6■■□□□ 13.5
SFPQP23246 SOX5-206ENST00000535530 576 ntTSL 49.64□□□□□ -0.872e-6■■□□□ 13.5
SFPQP23246 SOX5-207ENST00000536629 570 ntTSL 49.29□□□□□ -0.922e-6■■□□□ 13.5
SFPQP23246 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC8.32□□□□□ -1.082e-6■■□□□ 13.5
SFPQP23246 KIF2A-210ENST00000514082 874 ntTSL 1 (best)7.32□□□□□ -1.242e-6■■□□□ 13.5
SFPQP23246 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.73□□□□□ -1.492e-6■■□□□ 13.5
SFPQP23246 ARHGEF10L-201ENST00000167825 3018 ntTSL 215.38■□□□□ 0.051e-6■■□□□ 13.5
SFPQP23246 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.011e-6■■□□□ 13.5
SFPQP23246 ARHGEF10L-206ENST00000469726 4585 ntTSL 215.1■□□□□ 0.011e-6■■□□□ 13.5
SFPQP23246 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC14.23□□□□□ -0.131e-6■■□□□ 13.5
SFPQP23246 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.341e-6■■□□□ 13.5
SFPQP23246 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.66□□□□□ -1.346e-7■■□□□ 13.5
SFPQP23246 STRN3-207ENST00000555358 2208 ntTSL 1 (best)27.22■■□□□ 1.953e-6■■□□□ 13.4
SFPQP23246 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.043e-6■■□□□ 13.4
SFPQP23246 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.66■□□□□ 0.423e-6■■□□□ 13.4
SFPQP23246 HS6ST1-204ENST00000494089 585 ntTSL 220.06■□□□□ 0.87e-7■■□□□ 13.4
SFPQP23246 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.54■■□□□ 1.041e-6■■□□□ 13.4
SFPQP23246 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.941e-6■■□□□ 13.4
SFPQP23246 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.551e-6■■□□□ 13.4
SFPQP23246 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.62■□□□□ 0.251e-6■■□□□ 13.4
SFPQP23246 RREB1-206ENST00000471433 1021 ntTSL 515.16■□□□□ 0.021e-6■■□□□ 13.4
SFPQP23246 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.863e-6■■□□□ 13.4
SFPQP23246 SEPT9-235ENST00000591020 582 ntTSL 412.29□□□□□ -0.448e-7■■□□□ 13.4
SFPQP23246 FBXW11-207ENST00000519693 758 ntTSL 228.92■■■□□ 2.221e-6■■□□□ 13.4
SFPQP23246 FBXW11-208ENST00000520376 686 ntTSL 227■■□□□ 1.911e-6■■□□□ 13.4
SFPQP23246 FBXW11-212ENST00000523843 2099 ntTSL 524.57■■□□□ 1.521e-6■■□□□ 13.4
SFPQP23246 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.18■■□□□ 1.461e-6■■□□□ 13.4
SFPQP23246 FBXW11-204ENST00000517395 636 ntTSL 323.87■■□□□ 1.411e-6■■□□□ 13.4
SFPQP23246 FBXW11-210ENST00000522507 306 ntTSL 323.32■■□□□ 1.321e-6■■□□□ 13.4
SFPQP23246 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.951e-6■■□□□ 13.4
SFPQP23246 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC14.37□□□□□ -0.111e-6■■□□□ 13.4
SFPQP23246 KANSL1-229ENST00000639531 2731 ntTSL 514.44□□□□□ -0.13e-6■■□□□ 13.4
SFPQP23246 KANSL1-231ENST00000639853 1425 ntTSL 58.78□□□□□ -13e-6■■□□□ 13.4
SFPQP23246 KANSL1-213ENST00000576248 452 ntTSL 34.39□□□□□ -1.713e-6■■□□□ 13.4
SFPQP23246 WWOX-215ENST00000569332 1856 ntTSL 226.41■■□□□ 1.829e-7■■□□□ 13.4
SFPQP23246 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.4■■□□□ 1.029e-7■■□□□ 13.4
SFPQP23246 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.23■□□□□ 0.999e-7■■□□□ 13.4
SFPQP23246 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.969e-7■■□□□ 13.4
SFPQP23246 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.72■□□□□ 0.759e-7■■□□□ 13.4
SFPQP23246 SUPT3H-205ENST00000475057 1377 ntTSL 28.55□□□□□ -1.043e-6■■□□□ 13.4
SFPQP23246 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.453e-6■■□□□ 13.4
SFPQP23246 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.493e-6■■□□□ 13.4
SFPQP23246 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.622e-6■■□□□ 13.3
SFPQP23246 HS3ST3B1-202ENST00000466596 2808 ntTSL 217.43■□□□□ 0.382e-6■■□□□ 13.3
SFPQP23246 TOX3-205ENST00000568436 548 ntTSL 321.69■■□□□ 1.061e-6■■□□□ 13.3
SFPQP23246 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.321e-6■■□□□ 13.3
SFPQP23246 TOX3-203ENST00000563091 572 ntTSL 49.54□□□□□ -0.881e-6■■□□□ 13.3
SFPQP23246 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.381e-6■■□□□ 13.3
SFPQP23246 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.353e-9■■□□□ 13.3
SFPQP23246 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.023e-9■■□□□ 13.3
SFPQP23246 ATXN1-204ENST00000473388 1569 ntTSL 1 (best)8.33□□□□□ -1.086e-7■■□□□ 13.3
SFPQP23246 ATXN1-207ENST00000483954 744 ntTSL 36.17□□□□□ -1.426e-7■■□□□ 13.3
SFPQP23246 OAZ1-204ENST00000588673 780 ntTSL 322.73■■□□□ 1.232e-6■■□□□ 13.3
SFPQP23246 PRKCZ-210ENST00000470596 788 ntTSL 223.53■■□□□ 1.361e-7■■□□□ 13.3
SFPQP23246 PRKCZ-205ENST00000461465 480 ntTSL 419.06■□□□□ 0.641e-7■■□□□ 13.3
SFPQP23246 PRKCZ-222ENST00000496325 563 ntTSL 417.57■□□□□ 0.41e-7■■□□□ 13.3
SFPQP23246 TCF7L2-223ENST00000629706 1755 ntTSL 1 (best) BASIC13.68□□□□□ -0.221e-6■■□□□ 13.3
SFPQP23246 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC11.08□□□□□ -0.641e-6■■□□□ 13.3
SFPQP23246 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.711e-6■■□□□ 13.3
SFPQP23246 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC10.5□□□□□ -0.731e-6■■□□□ 13.3
SFPQP23246 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC9.6□□□□□ -0.871e-6■■□□□ 13.3
SFPQP23246 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.68□□□□□ -1.021e-6■■□□□ 13.3
SFPQP23246 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.34□□□□□ -1.071e-6■■□□□ 13.3
SFPQP23246 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.9□□□□□ -1.141e-6■■□□□ 13.3
SFPQP23246 TCF7L2-202ENST00000346198 667 ntTSL 37.63□□□□□ -1.191e-6■■□□□ 13.3
SFPQP23246 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.241e-6■■□□□ 13.3
SFPQP23246 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.74□□□□□ -1.331e-6■■□□□ 13.3
SFPQP23246 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.62□□□□□ -1.351e-6■■□□□ 13.3
SFPQP23246 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.6□□□□□ -1.351e-6■■□□□ 13.3
SFPQP23246 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.56□□□□□ -1.361e-6■■□□□ 13.3
SFPQP23246 CAPN15-202ENST00000562370 942 ntTSL 229.78■■■□□ 2.361e-6■■□□□ 13.3
SFPQP23246 CAPN15-207ENST00000568988 911 ntTSL 329.78■■■□□ 2.361e-6■■□□□ 13.3
SFPQP23246 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.831e-6■■□□□ 13.3
SFPQP23246 TFDP1-203ENST00000453989 792 ntTSL 326.65■■□□□ 1.862e-7■■□□□ 13.3
SFPQP23246 TFDP1-202ENST00000408980 866 ntTSL 525.6■■□□□ 1.692e-7■■□□□ 13.3
SFPQP23246 TFDP1-208ENST00000544902 1571 ntTSL 224.55■■□□□ 1.522e-7■■□□□ 13.3
SFPQP23246 TFDP1-206ENST00000475254 804 ntTSL 320.86■□□□□ 0.932e-7■■□□□ 13.3
SFPQP23246 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.262e-7■■□□□ 13.3
SFPQP23246 TFDP1-205ENST00000465174 955 ntTSL 315.13■□□□□ 0.012e-7■■□□□ 13.3
SFPQP23246 GTF3C2-204ENST00000423998 828 ntTSL 515.33■□□□□ 0.043e-7■■□□□ 13.3
SFPQP23246 GTF3C2-208ENST00000457748 557 ntTSL 513.71□□□□□ -0.213e-7■■□□□ 13.3
SFPQP23246 GTF3C2-201ENST00000264720 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.473e-7■■□□□ 13.3
SFPQP23246 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.73e-7■■□□□ 13.3
SFPQP23246 GOLPH3-202ENST00000503610 1074 ntTSL 335.93■■■■□ 3.341e-7■■□□□ 13.3
SFPQP23246 GOLPH3-203ENST00000512668 665 ntTSL 325.69■■□□□ 1.71e-7■■□□□ 13.3
SFPQP23246 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.121e-7■■□□□ 13.3
SFPQP23246 RREB1-205ENST00000467782 243 ntTSL 517.97■□□□□ 0.471e-6■■□□□ 13.2
SFPQP23246 RREB1-209ENST00000491191 998 ntTSL 515.16■□□□□ 0.021e-6■■□□□ 13.2
SFPQP23246 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.98■□□□□ 0.639e-7■■□□□ 13.2
SFPQP23246 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.9■□□□□ 0.625e-7■■□□□ 13.2
Retrieved 100 of 4,991 protein–RNA pairs in 129.9 ms