Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.94■■■□□ 2.22
SNRPA1P09661 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
SNRPA1P09661 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SNRPA1P09661 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
SNRPA1P09661 AC020928.2-201ENST00000588717 2197 ntBASIC28.94■■■□□ 2.22
SNRPA1P09661 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SNRPA1P09661 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SNRPA1P09661 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SNRPA1P09661 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SNRPA1P09661 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
SNRPA1P09661 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.93■■■□□ 2.22
SNRPA1P09661 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC28.92■■■□□ 2.22
SNRPA1P09661 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
SNRPA1P09661 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.92■■■□□ 2.22
SNRPA1P09661 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.92■■■□□ 2.22
SNRPA1P09661 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SNRPA1P09661 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.92■■■□□ 2.22
SNRPA1P09661 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
SNRPA1P09661 AC092666.2-201ENST00000613287 246 ntBASIC28.92■■■□□ 2.22
SNRPA1P09661 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SNRPA1P09661 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
SNRPA1P09661 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SNRPA1P09661 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.91■■■□□ 2.22
SNRPA1P09661 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SNRPA1P09661 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.91■■■□□ 2.22
SNRPA1P09661 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SNRPA1P09661 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.91■■■□□ 2.22
SNRPA1P09661 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.91■■■□□ 2.22
SNRPA1P09661 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.91■■■□□ 2.22
SNRPA1P09661 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SNRPA1P09661 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SNRPA1P09661 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SNRPA1P09661 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
SNRPA1P09661 SLC47A1P1-202ENST00000449666 945 ntBASIC28.9■■■□□ 2.22
SNRPA1P09661 AC087623.3-201ENST00000607047 1098 ntBASIC28.9■■■□□ 2.22
SNRPA1P09661 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.9■■■□□ 2.22
SNRPA1P09661 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SNRPA1P09661 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SNRPA1P09661 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
SNRPA1P09661 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.89■■■□□ 2.22
SNRPA1P09661 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SNRPA1P09661 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
SNRPA1P09661 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.89■■■□□ 2.22
SNRPA1P09661 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.89■■■□□ 2.22
SNRPA1P09661 AC126544.1-201ENST00000580842 1059 ntBASIC28.89■■■□□ 2.22
SNRPA1P09661 AL499627.2-201ENST00000606283 725 ntBASIC28.89■■■□□ 2.22
SNRPA1P09661 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SNRPA1P09661 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
SNRPA1P09661 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
SNRPA1P09661 FP325331.1-202ENST00000623531 1380 ntBASIC28.88■■■□□ 2.21
SNRPA1P09661 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.88■■■□□ 2.21
SNRPA1P09661 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.88■■■□□ 2.21
SNRPA1P09661 AC133637.1-201ENST00000624115 1537 ntBASIC28.88■■■□□ 2.21
SNRPA1P09661 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.88■■■□□ 2.21
SNRPA1P09661 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.87■■■□□ 2.21
SNRPA1P09661 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.87■■■□□ 2.21
SNRPA1P09661 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
SNRPA1P09661 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNRPA1P09661 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
SNRPA1P09661 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNRPA1P09661 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNRPA1P09661 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.86■■■□□ 2.21
SNRPA1P09661 AC104564.3-201ENST00000582367 638 ntBASIC28.86■■■□□ 2.21
SNRPA1P09661 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNRPA1P09661 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SNRPA1P09661 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.86■■■□□ 2.21
SNRPA1P09661 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.86■■■□□ 2.21
SNRPA1P09661 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNRPA1P09661 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNRPA1P09661 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNRPA1P09661 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.85■■■□□ 2.21
SNRPA1P09661 DUX4L4-201ENST00000566884 1269 ntBASIC28.85■■■□□ 2.21
SNRPA1P09661 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.85■■■□□ 2.21
SNRPA1P09661 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SNRPA1P09661 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
SNRPA1P09661 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
SNRPA1P09661 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.85■■■□□ 2.21
SNRPA1P09661 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SNRPA1P09661 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
SNRPA1P09661 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SNRPA1P09661 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
SNRPA1P09661 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.84■■■□□ 2.21
SNRPA1P09661 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SNRPA1P09661 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SNRPA1P09661 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
SNRPA1P09661 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SNRPA1P09661 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
SNRPA1P09661 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SNRPA1P09661 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SNRPA1P09661 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.82■■■□□ 2.2
SNRPA1P09661 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SNRPA1P09661 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.82■■■□□ 2.2
SNRPA1P09661 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNRPA1P09661 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
SNRPA1P09661 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
SNRPA1P09661 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SNRPA1P09661 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
SNRPA1P09661 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SNRPA1P09661 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SNRPA1P09661 TSPY26P-201ENST00000476365 1326 ntBASIC28.81■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms