Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CHGBP05060 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
CHGBP05060 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
CHGBP05060 AC006455.2-201ENST00000429931 906 ntBASIC27.2■■□□□ 1.94
CHGBP05060 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.2■■□□□ 1.94
CHGBP05060 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CHGBP05060 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CHGBP05060 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.19■■□□□ 1.94
CHGBP05060 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CHGBP05060 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CHGBP05060 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
CHGBP05060 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CHGBP05060 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CHGBP05060 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CHGBP05060 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.19■■□□□ 1.94
CHGBP05060 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CHGBP05060 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHGBP05060 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHGBP05060 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHGBP05060 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHGBP05060 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
CHGBP05060 AC079630.1-202ENST00000618127 1840 ntBASIC27.18■■□□□ 1.94
CHGBP05060 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CHGBP05060 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHGBP05060 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHGBP05060 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
CHGBP05060 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHGBP05060 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CHGBP05060 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
CHGBP05060 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.17■■□□□ 1.94
CHGBP05060 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHGBP05060 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHGBP05060 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHGBP05060 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
CHGBP05060 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.16■■□□□ 1.94
CHGBP05060 AC099791.2-201ENST00000605725 427 ntBASIC27.16■■□□□ 1.94
CHGBP05060 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.16■■□□□ 1.94
CHGBP05060 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHGBP05060 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
CHGBP05060 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.16■■□□□ 1.94
CHGBP05060 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHGBP05060 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHGBP05060 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHGBP05060 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CHGBP05060 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
CHGBP05060 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.15■■□□□ 1.94
CHGBP05060 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHGBP05060 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.15■■□□□ 1.94
CHGBP05060 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHGBP05060 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
CHGBP05060 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CHGBP05060 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CHGBP05060 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
CHGBP05060 AC110285.6-201ENST00000617652 491 ntBASIC27.14■■□□□ 1.94
CHGBP05060 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CHGBP05060 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHGBP05060 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
CHGBP05060 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CHGBP05060 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHGBP05060 AC096631.2-201ENST00000436136 790 ntBASIC27.13■■□□□ 1.93
CHGBP05060 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.13■■□□□ 1.93
CHGBP05060 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHGBP05060 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.13■■□□□ 1.93
CHGBP05060 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CHGBP05060 SRD5A1P1-201ENST00000442297 786 ntBASIC27.12■■□□□ 1.93
CHGBP05060 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CHGBP05060 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHGBP05060 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
CHGBP05060 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.12■■□□□ 1.93
CHGBP05060 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHGBP05060 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CHGBP05060 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CHGBP05060 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CHGBP05060 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.11■■□□□ 1.93
CHGBP05060 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.11■■□□□ 1.93
CHGBP05060 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.11■■□□□ 1.93
CHGBP05060 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.11■■□□□ 1.93
CHGBP05060 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHGBP05060 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CHGBP05060 ANOS2P-203ENST00000472227 1816 ntBASIC27.11■■□□□ 1.93
CHGBP05060 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHGBP05060 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHGBP05060 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHGBP05060 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHGBP05060 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.1■■□□□ 1.93
CHGBP05060 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CHGBP05060 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CHGBP05060 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.1■■□□□ 1.93
CHGBP05060 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHGBP05060 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHGBP05060 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHGBP05060 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHGBP05060 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHGBP05060 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.09■■□□□ 1.93
CHGBP05060 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.09■■□□□ 1.93
CHGBP05060 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHGBP05060 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHGBP05060 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHGBP05060 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
CHGBP05060 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms