Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 SERBP1P1-201ENST00000396021 1160 ntBASIC22.28■■□□□ 1.16
SOD1P00441 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.28■■□□□ 1.16
SOD1P00441 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SOD1P00441 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.28■■□□□ 1.16
SOD1P00441 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SOD1P00441 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOD1P00441 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOD1P00441 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOD1P00441 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.27■■□□□ 1.16
SOD1P00441 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.27■■□□□ 1.16
SOD1P00441 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.27■■□□□ 1.16
SOD1P00441 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOD1P00441 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.27■■□□□ 1.16
SOD1P00441 DUX4L19-201ENST00000557448 1267 ntBASIC22.27■■□□□ 1.16
SOD1P00441 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.27■■□□□ 1.16
SOD1P00441 AL136162.1-201ENST00000607711 1078 ntBASIC22.27■■□□□ 1.16
SOD1P00441 AC092171.4-201ENST00000609130 632 ntBASIC22.27■■□□□ 1.16
SOD1P00441 AC106739.1-201ENST00000617035 715 ntBASIC22.27■■□□□ 1.16
SOD1P00441 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.27■■□□□ 1.16
SOD1P00441 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOD1P00441 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 SYT6-210ENST00000641643 1587 ntBASIC22.26■■□□□ 1.15
SOD1P00441 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SOD1P00441 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.26■■□□□ 1.15
SOD1P00441 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 AC024257.2-201ENST00000549699 147 ntBASIC22.26■■□□□ 1.15
SOD1P00441 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SOD1P00441 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.26■■□□□ 1.15
SOD1P00441 AC009086.3-201ENST00000623486 1008 ntBASIC22.26■■□□□ 1.15
SOD1P00441 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.26■■□□□ 1.15
SOD1P00441 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SOD1P00441 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOD1P00441 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.26■■□□□ 1.15
SOD1P00441 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SOD1P00441 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.25■■□□□ 1.15
SOD1P00441 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SOD1P00441 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.25■■□□□ 1.15
SOD1P00441 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SOD1P00441 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.25■■□□□ 1.15
SOD1P00441 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.25■■□□□ 1.15
SOD1P00441 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SOD1P00441 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.25■■□□□ 1.15
SOD1P00441 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SOD1P00441 AC135279.3-201ENST00000610945 1311 ntBASIC22.25■■□□□ 1.15
SOD1P00441 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SOD1P00441 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.24■■□□□ 1.15
SOD1P00441 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SOD1P00441 PBX2P1-201ENST00000493219 1291 ntBASIC22.24■■□□□ 1.15
SOD1P00441 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SOD1P00441 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SOD1P00441 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SOD1P00441 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SOD1P00441 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SOD1P00441 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SOD1P00441 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SOD1P00441 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SOD1P00441 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SOD1P00441 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SOD1P00441 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SOD1P00441 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SOD1P00441 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SOD1P00441 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.23■■□□□ 1.15
SOD1P00441 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.23■■□□□ 1.15
SOD1P00441 AC133561.4-201ENST00000566112 224 ntBASIC22.23■■□□□ 1.15
SOD1P00441 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.23■■□□□ 1.15
SOD1P00441 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.23■■□□□ 1.15
SOD1P00441 AC144652.1-201ENST00000609974 1624 ntBASIC22.23■■□□□ 1.15
SOD1P00441 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOD1P00441 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
SOD1P00441 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SOD1P00441 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SOD1P00441 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOD1P00441 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOD1P00441 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SOD1P00441 MIR3181-201ENST00000578512 73 ntBASIC22.22■■□□□ 1.15
SOD1P00441 AL031432.3-201ENST00000607698 485 ntBASIC22.22■■□□□ 1.15
SOD1P00441 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.22■■□□□ 1.15
SOD1P00441 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOD1P00441 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SOD1P00441 AC079630.1-202ENST00000618127 1840 ntBASIC22.22■■□□□ 1.15
SOD1P00441 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SOD1P00441 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SOD1P00441 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SOD1P00441 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SOD1P00441 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SOD1P00441 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.21■■□□□ 1.15
SOD1P00441 AL138724.1-201ENST00000606771 1088 ntBASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms