Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF253O75346 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF253O75346 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF253O75346 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF253O75346 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF253O75346 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF253O75346 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF253O75346 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF253O75346 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF253O75346 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF253O75346 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.39■□□□□ 0.38
ZNF253O75346 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF253O75346 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF253O75346 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ZNF253O75346 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF253O75346 AC092068.2-201ENST00000590491 1708 ntBASIC17.39■□□□□ 0.37
ZNF253O75346 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF253O75346 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF253O75346 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF253O75346 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF253O75346 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF253O75346 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF253O75346 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 MIR6765-201ENST00000614092 87 ntBASIC17.38■□□□□ 0.37
ZNF253O75346 AC137767.1-201ENST00000602918 1920 ntBASIC17.38■□□□□ 0.37
ZNF253O75346 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF253O75346 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF253O75346 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.37■□□□□ 0.37
ZNF253O75346 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF253O75346 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF253O75346 AL592293.1-201ENST00000502889 1188 ntBASIC17.37■□□□□ 0.37
ZNF253O75346 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF253O75346 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF253O75346 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF253O75346 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 ANOS2P-203ENST00000472227 1816 ntBASIC17.37■□□□□ 0.37
ZNF253O75346 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF253O75346 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF253O75346 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZNF253O75346 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ZNF253O75346 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ZNF253O75346 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF253O75346 AL022069.1-201ENST00000568025 1636 ntBASIC17.36■□□□□ 0.37
ZNF253O75346 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF253O75346 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF253O75346 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF253O75346 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF253O75346 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF253O75346 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
ZNF253O75346 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF253O75346 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF253O75346 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF253O75346 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF253O75346 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF253O75346 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF253O75346 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF253O75346 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF253O75346 AL121603.2-201ENST00000557373 2117 ntBASIC17.35■□□□□ 0.37
ZNF253O75346 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF253O75346 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF253O75346 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms