Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TSPAN3O60637 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TSPAN3O60637 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TSPAN3O60637 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TSPAN3O60637 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TSPAN3O60637 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TSPAN3O60637 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.21■■□□□ 1.31
TSPAN3O60637 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TSPAN3O60637 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TSPAN3O60637 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TSPAN3O60637 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TSPAN3O60637 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TSPAN3O60637 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TSPAN3O60637 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TSPAN3O60637 AC133561.4-201ENST00000566112 224 ntBASIC23.2■■□□□ 1.3
TSPAN3O60637 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TSPAN3O60637 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.19■■□□□ 1.3
TSPAN3O60637 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.19■■□□□ 1.3
TSPAN3O60637 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.19■■□□□ 1.3
TSPAN3O60637 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.19■■□□□ 1.3
TSPAN3O60637 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TSPAN3O60637 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
TSPAN3O60637 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TSPAN3O60637 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TSPAN3O60637 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.18■■□□□ 1.3
TSPAN3O60637 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.18■■□□□ 1.3
TSPAN3O60637 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.18■■□□□ 1.3
TSPAN3O60637 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.18■■□□□ 1.3
TSPAN3O60637 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TSPAN3O60637 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TSPAN3O60637 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TSPAN3O60637 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TSPAN3O60637 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.17■■□□□ 1.3
TSPAN3O60637 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.17■■□□□ 1.3
TSPAN3O60637 AC142381.2-201ENST00000566120 298 ntBASIC23.17■■□□□ 1.3
TSPAN3O60637 MIR4767-201ENST00000582827 78 ntBASIC23.17■■□□□ 1.3
TSPAN3O60637 AL031432.3-201ENST00000607698 485 ntBASIC23.17■■□□□ 1.3
TSPAN3O60637 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TSPAN3O60637 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TSPAN3O60637 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TSPAN3O60637 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TSPAN3O60637 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.16■■□□□ 1.3
TSPAN3O60637 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TSPAN3O60637 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TSPAN3O60637 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TSPAN3O60637 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TSPAN3O60637 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.15■■□□□ 1.3
TSPAN3O60637 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TSPAN3O60637 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.15■■□□□ 1.3
TSPAN3O60637 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TSPAN3O60637 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TSPAN3O60637 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
TSPAN3O60637 MIR3181-201ENST00000578512 73 ntBASIC23.15■■□□□ 1.3
TSPAN3O60637 pRNA.6-201ENST00000610482 90 ntBASIC23.15■■□□□ 1.3
TSPAN3O60637 pRNA.5-201ENST00000612139 90 ntBASIC23.15■■□□□ 1.3
TSPAN3O60637 pRNA.11-201ENST00000618423 90 ntBASIC23.15■■□□□ 1.3
TSPAN3O60637 pRNA.13-201ENST00000619112 90 ntBASIC23.15■■□□□ 1.3
TSPAN3O60637 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TSPAN3O60637 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TSPAN3O60637 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TSPAN3O60637 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TSPAN3O60637 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.14■■□□□ 1.29
TSPAN3O60637 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.14■■□□□ 1.29
TSPAN3O60637 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.14■■□□□ 1.29
TSPAN3O60637 AL355001.2-201ENST00000620617 1191 ntBASIC23.14■■□□□ 1.29
TSPAN3O60637 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TSPAN3O60637 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
TSPAN3O60637 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 EDA-201ENST00000338901 1233 ntBASIC23.13■■□□□ 1.29
TSPAN3O60637 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.13■■□□□ 1.29
TSPAN3O60637 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.13■■□□□ 1.29
TSPAN3O60637 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
TSPAN3O60637 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.13■■□□□ 1.29
TSPAN3O60637 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TSPAN3O60637 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TSPAN3O60637 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TSPAN3O60637 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TSPAN3O60637 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TSPAN3O60637 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TSPAN3O60637 SUDS3P1-201ENST00000505831 966 ntBASIC23.12■■□□□ 1.29
TSPAN3O60637 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.12■■□□□ 1.29
TSPAN3O60637 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.12■■□□□ 1.29
TSPAN3O60637 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TSPAN3O60637 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.12■■□□□ 1.29
TSPAN3O60637 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TSPAN3O60637 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TSPAN3O60637 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TSPAN3O60637 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TSPAN3O60637 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.11■■□□□ 1.29
TSPAN3O60637 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TSPAN3O60637 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TSPAN3O60637 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.11■■□□□ 1.29
TSPAN3O60637 AF213884.3-201ENST00000563833 479 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms