Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PLOD3O60568 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PLOD3O60568 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PLOD3O60568 ANOS2P-203ENST00000472227 1816 ntBASIC21.11■□□□□ 0.97
PLOD3O60568 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.11■□□□□ 0.97
PLOD3O60568 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.11■□□□□ 0.97
PLOD3O60568 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.11■□□□□ 0.97
PLOD3O60568 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.11■□□□□ 0.97
PLOD3O60568 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 AC012676.1-201ENST00000574705 1949 ntBASIC21.11■□□□□ 0.97
PLOD3O60568 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.11■□□□□ 0.97
PLOD3O60568 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PLOD3O60568 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.1■□□□□ 0.97
PLOD3O60568 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PLOD3O60568 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PLOD3O60568 AC092068.2-201ENST00000590491 1708 ntBASIC21.1■□□□□ 0.97
PLOD3O60568 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.1■□□□□ 0.97
PLOD3O60568 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.1■□□□□ 0.97
PLOD3O60568 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PLOD3O60568 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PLOD3O60568 TSPY9P-201ENST00000440215 945 ntBASIC21.1■□□□□ 0.97
PLOD3O60568 TSPY11P-201ENST00000442607 1045 ntBASIC21.1■□□□□ 0.97
PLOD3O60568 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.1■□□□□ 0.97
PLOD3O60568 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.1■□□□□ 0.97
PLOD3O60568 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PLOD3O60568 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PLOD3O60568 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.1■□□□□ 0.97
PLOD3O60568 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PLOD3O60568 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PLOD3O60568 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PLOD3O60568 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PLOD3O60568 GUSBP5-201ENST00000418136 578 ntBASIC21.09■□□□□ 0.97
PLOD3O60568 UNC93B8-201ENST00000511903 705 ntBASIC21.09■□□□□ 0.97
PLOD3O60568 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.09■□□□□ 0.97
PLOD3O60568 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PLOD3O60568 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.09■□□□□ 0.97
PLOD3O60568 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PLOD3O60568 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PLOD3O60568 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PLOD3O60568 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PLOD3O60568 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PLOD3O60568 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PLOD3O60568 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PLOD3O60568 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PLOD3O60568 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PLOD3O60568 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.08■□□□□ 0.97
PLOD3O60568 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PLOD3O60568 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
PLOD3O60568 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PLOD3O60568 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.08■□□□□ 0.97
PLOD3O60568 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PLOD3O60568 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PLOD3O60568 DUSP8P5-201ENST00000422884 1815 ntBASIC21.08■□□□□ 0.96
PLOD3O60568 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PLOD3O60568 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PLOD3O60568 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.08■□□□□ 0.96
PLOD3O60568 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.07■□□□□ 0.96
PLOD3O60568 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.07■□□□□ 0.96
PLOD3O60568 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.07■□□□□ 0.96
PLOD3O60568 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.07■□□□□ 0.96
PLOD3O60568 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PLOD3O60568 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PLOD3O60568 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PLOD3O60568 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PLOD3O60568 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PLOD3O60568 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PLOD3O60568 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
PLOD3O60568 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PLOD3O60568 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.06■□□□□ 0.96
PLOD3O60568 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PLOD3O60568 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PLOD3O60568 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.06■□□□□ 0.96
PLOD3O60568 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.06■□□□□ 0.96
PLOD3O60568 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PLOD3O60568 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.06■□□□□ 0.96
PLOD3O60568 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PLOD3O60568 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PLOD3O60568 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.05■□□□□ 0.96
PLOD3O60568 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PLOD3O60568 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.04■□□□□ 0.96
PLOD3O60568 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PLOD3O60568 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms