Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPHS1O60500 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPHS1O60500 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPHS1O60500 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
NPHS1O60500 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.97■■□□□ 1.11
NPHS1O60500 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.97■■□□□ 1.11
NPHS1O60500 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.96■■□□□ 1.11
NPHS1O60500 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NPHS1O60500 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPHS1O60500 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPHS1O60500 AC242852.2-201ENST00000615738 1807 ntBASIC21.96■■□□□ 1.11
NPHS1O60500 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
NPHS1O60500 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.96■■□□□ 1.11
NPHS1O60500 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.95■■□□□ 1.11
NPHS1O60500 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPHS1O60500 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPHS1O60500 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NPHS1O60500 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.95■■□□□ 1.1
NPHS1O60500 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPHS1O60500 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPHS1O60500 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
NPHS1O60500 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
NPHS1O60500 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPHS1O60500 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.95■■□□□ 1.1
NPHS1O60500 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NPHS1O60500 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.94■■□□□ 1.1
NPHS1O60500 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 AC004448.1-201ENST00000458332 883 ntBASIC21.94■■□□□ 1.1
NPHS1O60500 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 DUX4L18-201ENST00000553347 1267 ntBASIC21.94■■□□□ 1.1
NPHS1O60500 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.94■■□□□ 1.1
NPHS1O60500 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
NPHS1O60500 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.94■■□□□ 1.1
NPHS1O60500 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.94■■□□□ 1.1
NPHS1O60500 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPHS1O60500 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPHS1O60500 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPHS1O60500 KRT18P24-201ENST00000344739 1156 ntBASIC21.93■■□□□ 1.1
NPHS1O60500 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.93■■□□□ 1.1
NPHS1O60500 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.93■■□□□ 1.1
NPHS1O60500 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NPHS1O60500 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NPHS1O60500 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.92■■□□□ 1.1
NPHS1O60500 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 MIR4281-201ENST00000580852 62 ntBASIC21.92■■□□□ 1.1
NPHS1O60500 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPHS1O60500 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPHS1O60500 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPHS1O60500 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPHS1O60500 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPHS1O60500 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPHS1O60500 AC137767.1-201ENST00000602918 1920 ntBASIC21.91■■□□□ 1.1
NPHS1O60500 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.91■■□□□ 1.1
NPHS1O60500 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPHS1O60500 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.91■■□□□ 1.1
NPHS1O60500 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPHS1O60500 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPHS1O60500 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.9■■□□□ 1.1
NPHS1O60500 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NPHS1O60500 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
NPHS1O60500 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NPHS1O60500 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.9■■□□□ 1.1
NPHS1O60500 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NPHS1O60500 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPHS1O60500 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPHS1O60500 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPHS1O60500 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPHS1O60500 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPHS1O60500 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPHS1O60500 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.9■■□□□ 1.1
NPHS1O60500 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPHS1O60500 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NPHS1O60500 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPHS1O60500 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPHS1O60500 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.89■■□□□ 1.09
NPHS1O60500 THA1P-201ENST00000590384 1145 ntBASIC21.89■■□□□ 1.09
NPHS1O60500 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
NPHS1O60500 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPHS1O60500 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPHS1O60500 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPHS1O60500 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPHS1O60500 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NPHS1O60500 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.88■■□□□ 1.09
NPHS1O60500 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.88■■□□□ 1.09
NPHS1O60500 AL353803.4-201ENST00000565882 1934 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms