Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SIPA1L3O60292 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 MIR6821-201ENST00000617625 74 ntBASIC29.21■■■□□ 2.27
SIPA1L3O60292 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
SIPA1L3O60292 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC29.2■■■□□ 2.27
SIPA1L3O60292 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC29.2■■■□□ 2.27
SIPA1L3O60292 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
SIPA1L3O60292 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SIPA1L3O60292 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SIPA1L3O60292 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SIPA1L3O60292 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
SIPA1L3O60292 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC29.2■■■□□ 2.26
SIPA1L3O60292 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SIPA1L3O60292 AL499627.2-201ENST00000606283 725 ntBASIC29.2■■■□□ 2.26
SIPA1L3O60292 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.2■■■□□ 2.26
SIPA1L3O60292 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
SIPA1L3O60292 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.19■■■□□ 2.26
SIPA1L3O60292 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.19■■■□□ 2.26
SIPA1L3O60292 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.19■■■□□ 2.26
SIPA1L3O60292 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SIPA1L3O60292 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
SIPA1L3O60292 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.19■■■□□ 2.26
SIPA1L3O60292 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC29.18■■■□□ 2.26
SIPA1L3O60292 AC010525.1-201ENST00000585559 441 ntBASIC29.18■■■□□ 2.26
SIPA1L3O60292 AC087623.3-201ENST00000607047 1098 ntBASIC29.18■■■□□ 2.26
SIPA1L3O60292 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
SIPA1L3O60292 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SIPA1L3O60292 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.18■■■□□ 2.26
SIPA1L3O60292 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.18■■■□□ 2.26
SIPA1L3O60292 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SIPA1L3O60292 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
SIPA1L3O60292 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.17■■■□□ 2.26
SIPA1L3O60292 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
SIPA1L3O60292 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.17■■■□□ 2.26
SIPA1L3O60292 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SIPA1L3O60292 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SIPA1L3O60292 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.17■■■□□ 2.26
SIPA1L3O60292 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.17■■■□□ 2.26
SIPA1L3O60292 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SIPA1L3O60292 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
SIPA1L3O60292 AC027612.3-201ENST00000413684 1047 ntBASIC29.16■■■□□ 2.26
SIPA1L3O60292 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.16■■■□□ 2.26
SIPA1L3O60292 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SIPA1L3O60292 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
SIPA1L3O60292 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
SIPA1L3O60292 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SIPA1L3O60292 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SIPA1L3O60292 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SIPA1L3O60292 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SIPA1L3O60292 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
SIPA1L3O60292 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.16■■■□□ 2.26
SIPA1L3O60292 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.16■■■□□ 2.26
SIPA1L3O60292 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.16■■■□□ 2.26
SIPA1L3O60292 AC104564.3-201ENST00000582367 638 ntBASIC29.16■■■□□ 2.26
SIPA1L3O60292 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SIPA1L3O60292 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SIPA1L3O60292 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
SIPA1L3O60292 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SIPA1L3O60292 IRS3P-201ENST00000223076 1006 ntBASIC29.15■■■□□ 2.26
SIPA1L3O60292 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.15■■■□□ 2.26
SIPA1L3O60292 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SIPA1L3O60292 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SIPA1L3O60292 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC29.15■■■□□ 2.26
SIPA1L3O60292 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SIPA1L3O60292 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
SIPA1L3O60292 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SIPA1L3O60292 LINC00543-201ENST00000567234 1845 ntBASIC29.14■■■□□ 2.26
SIPA1L3O60292 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC29.14■■■□□ 2.26
SIPA1L3O60292 OR2I1P-207ENST00000453522 948 ntBASIC29.13■■■□□ 2.25
SIPA1L3O60292 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.13■■■□□ 2.25
SIPA1L3O60292 MIR5787-201ENST00000611784 55 ntBASIC29.13■■■□□ 2.25
SIPA1L3O60292 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC29.13■■■□□ 2.25
SIPA1L3O60292 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.13■■■□□ 2.25
SIPA1L3O60292 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SIPA1L3O60292 IGHV3-19-201ENST00000521488 291 ntBASIC29.13■■■□□ 2.25
SIPA1L3O60292 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SIPA1L3O60292 AC144652.1-201ENST00000609974 1624 ntBASIC29.13■■■□□ 2.25
SIPA1L3O60292 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SIPA1L3O60292 AC133637.1-201ENST00000624115 1537 ntBASIC29.12■■■□□ 2.25
SIPA1L3O60292 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SIPA1L3O60292 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SIPA1L3O60292 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC29.12■■■□□ 2.25
SIPA1L3O60292 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SIPA1L3O60292 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SIPA1L3O60292 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SIPA1L3O60292 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SIPA1L3O60292 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SIPA1L3O60292 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
SIPA1L3O60292 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
SIPA1L3O60292 AC012414.1-201ENST00000556676 535 ntBASIC29.11■■■□□ 2.25
SIPA1L3O60292 AL031602.1-201ENST00000633169 911 ntBASIC29.11■■■□□ 2.25
SIPA1L3O60292 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
SIPA1L3O60292 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms