Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRICKLE3O43900 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRICKLE3O43900 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRICKLE3O43900 MIR935-201ENST00000401179 91 ntBASIC21.67■■□□□ 1.06
PRICKLE3O43900 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRICKLE3O43900 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRICKLE3O43900 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.67■■□□□ 1.06
PRICKLE3O43900 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.67■■□□□ 1.06
PRICKLE3O43900 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.67■■□□□ 1.06
PRICKLE3O43900 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRICKLE3O43900 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRICKLE3O43900 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PRICKLE3O43900 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PRICKLE3O43900 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.66■■□□□ 1.06
PRICKLE3O43900 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRICKLE3O43900 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.66■■□□□ 1.06
PRICKLE3O43900 SRD5A1P1-201ENST00000442297 786 ntBASIC21.66■■□□□ 1.06
PRICKLE3O43900 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.66■■□□□ 1.06
PRICKLE3O43900 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.66■■□□□ 1.06
PRICKLE3O43900 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PRICKLE3O43900 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PRICKLE3O43900 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRICKLE3O43900 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRICKLE3O43900 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PRICKLE3O43900 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PRICKLE3O43900 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.65■■□□□ 1.06
PRICKLE3O43900 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRICKLE3O43900 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRICKLE3O43900 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PRICKLE3O43900 AC079630.1-202ENST00000618127 1840 ntBASIC21.64■■□□□ 1.06
PRICKLE3O43900 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRICKLE3O43900 FP325331.1-202ENST00000623531 1380 ntBASIC21.64■■□□□ 1.06
PRICKLE3O43900 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRICKLE3O43900 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRICKLE3O43900 AC144652.1-201ENST00000609974 1624 ntBASIC21.64■■□□□ 1.05
PRICKLE3O43900 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PRICKLE3O43900 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
PRICKLE3O43900 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRICKLE3O43900 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRICKLE3O43900 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.63■■□□□ 1.05
PRICKLE3O43900 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRICKLE3O43900 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.63■■□□□ 1.05
PRICKLE3O43900 AC099791.2-201ENST00000605725 427 ntBASIC21.63■■□□□ 1.05
PRICKLE3O43900 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRICKLE3O43900 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PRICKLE3O43900 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.63■■□□□ 1.05
PRICKLE3O43900 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRICKLE3O43900 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE3O43900 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.62■■□□□ 1.05
PRICKLE3O43900 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE3O43900 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE3O43900 AC241377.3-202ENST00000626088 1088 ntBASIC21.62■■□□□ 1.05
PRICKLE3O43900 AC241585.3-202ENST00000628937 1088 ntBASIC21.62■■□□□ 1.05
PRICKLE3O43900 AC245100.8-202ENST00000629247 1058 ntBASIC21.62■■□□□ 1.05
PRICKLE3O43900 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PRICKLE3O43900 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRICKLE3O43900 ANOS2P-203ENST00000472227 1816 ntBASIC21.62■■□□□ 1.05
PRICKLE3O43900 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PRICKLE3O43900 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.61■■□□□ 1.05
PRICKLE3O43900 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE3O43900 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PRICKLE3O43900 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE3O43900 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.61■■□□□ 1.05
PRICKLE3O43900 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.61■■□□□ 1.05
PRICKLE3O43900 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PRICKLE3O43900 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.61■■□□□ 1.05
PRICKLE3O43900 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRICKLE3O43900 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.61■■□□□ 1.05
PRICKLE3O43900 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE3O43900 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE3O43900 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE3O43900 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE3O43900 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE3O43900 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.6■■□□□ 1.05
PRICKLE3O43900 DUX4L4-201ENST00000566884 1269 ntBASIC21.6■■□□□ 1.05
PRICKLE3O43900 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE3O43900 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRICKLE3O43900 AC092068.2-201ENST00000590491 1708 ntBASIC21.6■■□□□ 1.05
PRICKLE3O43900 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE3O43900 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PRICKLE3O43900 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE3O43900 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.59■■□□□ 1.05
PRICKLE3O43900 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE3O43900 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE3O43900 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.59■■□□□ 1.05
PRICKLE3O43900 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE3O43900 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRICKLE3O43900 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRICKLE3O43900 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.58■■□□□ 1.05
PRICKLE3O43900 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRICKLE3O43900 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.58■■□□□ 1.05
PRICKLE3O43900 AC006455.2-201ENST00000429931 906 ntBASIC21.58■■□□□ 1.05
PRICKLE3O43900 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.58■■□□□ 1.05
PRICKLE3O43900 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.58■■□□□ 1.05
PRICKLE3O43900 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.58■■□□□ 1.05
PRICKLE3O43900 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRICKLE3O43900 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.58■■□□□ 1.04
PRICKLE3O43900 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRICKLE3O43900 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PRICKLE3O43900 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms