Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNAB3O43448 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.94■□□□□ 0.62
KCNAB3O43448 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNAB3O43448 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNAB3O43448 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNAB3O43448 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNAB3O43448 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KCNAB3O43448 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNAB3O43448 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.94■□□□□ 0.62
KCNAB3O43448 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNAB3O43448 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
KCNAB3O43448 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNAB3O43448 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
KCNAB3O43448 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
KCNAB3O43448 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KCNAB3O43448 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNAB3O43448 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNAB3O43448 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNAB3O43448 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNAB3O43448 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.92■□□□□ 0.62
KCNAB3O43448 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNAB3O43448 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
KCNAB3O43448 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNAB3O43448 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KCNAB3O43448 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KCNAB3O43448 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 RPS2P7-201ENST00000447334 885 ntBASIC18.92■□□□□ 0.62
KCNAB3O43448 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 RARRES2P6-201ENST00000567333 442 ntBASIC18.92■□□□□ 0.62
KCNAB3O43448 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNAB3O43448 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KCNAB3O43448 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
KCNAB3O43448 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNAB3O43448 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNAB3O43448 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNAB3O43448 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNAB3O43448 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNAB3O43448 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.91■□□□□ 0.62
KCNAB3O43448 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNAB3O43448 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNAB3O43448 GUSBP5-202ENST00000510805 1989 ntBASIC18.91■□□□□ 0.62
KCNAB3O43448 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNAB3O43448 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNAB3O43448 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KCNAB3O43448 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNAB3O43448 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNAB3O43448 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNAB3O43448 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KCNAB3O43448 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNAB3O43448 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNAB3O43448 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
KCNAB3O43448 AC087393.1-201ENST00000582896 145 ntBASIC18.9■□□□□ 0.62
KCNAB3O43448 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNAB3O43448 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.9■□□□□ 0.62
KCNAB3O43448 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KCNAB3O43448 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNAB3O43448 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNAB3O43448 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KCNAB3O43448 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNAB3O43448 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNAB3O43448 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNAB3O43448 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNAB3O43448 AC104564.3-201ENST00000582367 638 ntBASIC18.89■□□□□ 0.61
KCNAB3O43448 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNAB3O43448 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNAB3O43448 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
KCNAB3O43448 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNAB3O43448 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
KCNAB3O43448 MIR6089-201ENST00000616698 64 ntBASIC18.88■□□□□ 0.61
KCNAB3O43448 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNAB3O43448 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNAB3O43448 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNAB3O43448 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNAB3O43448 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNAB3O43448 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNAB3O43448 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNAB3O43448 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KCNAB3O43448 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNAB3O43448 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
KCNAB3O43448 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNAB3O43448 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms