Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF1O43189 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF1O43189 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHF1O43189 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PHF1O43189 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF1O43189 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.28■□□□□ 0.68
PHF1O43189 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.28■□□□□ 0.68
PHF1O43189 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.28■□□□□ 0.68
PHF1O43189 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF1O43189 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHF1O43189 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
PHF1O43189 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.28■□□□□ 0.68
PHF1O43189 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHF1O43189 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PHF1O43189 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.27■□□□□ 0.68
PHF1O43189 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHF1O43189 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHF1O43189 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHF1O43189 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PHF1O43189 PBX2P1-201ENST00000493219 1291 ntBASIC19.27■□□□□ 0.68
PHF1O43189 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.27■□□□□ 0.68
PHF1O43189 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.27■□□□□ 0.68
PHF1O43189 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.27■□□□□ 0.68
PHF1O43189 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
PHF1O43189 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHF1O43189 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PHF1O43189 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHF1O43189 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHF1O43189 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PHF1O43189 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.26■□□□□ 0.67
PHF1O43189 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF1O43189 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.26■□□□□ 0.67
PHF1O43189 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHF1O43189 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.26■□□□□ 0.67
PHF1O43189 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.26■□□□□ 0.67
PHF1O43189 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF1O43189 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF1O43189 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHF1O43189 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHF1O43189 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF1O43189 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.25■□□□□ 0.67
PHF1O43189 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.25■□□□□ 0.67
PHF1O43189 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.25■□□□□ 0.67
PHF1O43189 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.25■□□□□ 0.67
PHF1O43189 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PHF1O43189 AC106739.1-201ENST00000617035 715 ntBASIC19.25■□□□□ 0.67
PHF1O43189 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.25■□□□□ 0.67
PHF1O43189 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF1O43189 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.25■□□□□ 0.67
PHF1O43189 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHF1O43189 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF1O43189 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF1O43189 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.24■□□□□ 0.67
PHF1O43189 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF1O43189 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF1O43189 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF1O43189 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF1O43189 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PHF1O43189 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.24■□□□□ 0.67
PHF1O43189 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.24■□□□□ 0.67
PHF1O43189 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.24■□□□□ 0.67
PHF1O43189 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.24■□□□□ 0.67
PHF1O43189 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHF1O43189 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.24■□□□□ 0.67
PHF1O43189 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF1O43189 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF1O43189 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHF1O43189 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF1O43189 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF1O43189 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.23■□□□□ 0.67
PHF1O43189 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.23■□□□□ 0.67
PHF1O43189 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF1O43189 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.22■□□□□ 0.67
PHF1O43189 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHF1O43189 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.22■□□□□ 0.67
PHF1O43189 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF1O43189 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF1O43189 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF1O43189 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHF1O43189 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.21■□□□□ 0.67
PHF1O43189 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PHF1O43189 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 C9orf163-202ENST00000624034 2573 ntBASIC19.21■□□□□ 0.67
PHF1O43189 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.21■□□□□ 0.67
PHF1O43189 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.21■□□□□ 0.67
PHF1O43189 AL512631.2-201ENST00000604634 923 ntBASIC19.21■□□□□ 0.67
PHF1O43189 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.21■□□□□ 0.67
PHF1O43189 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.21■□□□□ 0.67
PHF1O43189 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF1O43189 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
PHF1O43189 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PHF1O43189 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PHF1O43189 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms