Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GSC2O15499 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GSC2O15499 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
GSC2O15499 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GSC2O15499 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GSC2O15499 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GSC2O15499 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
GSC2O15499 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GSC2O15499 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GSC2O15499 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
GSC2O15499 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GSC2O15499 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GSC2O15499 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.65■■□□□ 1.06
GSC2O15499 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GSC2O15499 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.65■■□□□ 1.06
GSC2O15499 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GSC2O15499 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GSC2O15499 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GSC2O15499 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
GSC2O15499 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
GSC2O15499 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GSC2O15499 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.64■■□□□ 1.05
GSC2O15499 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.64■■□□□ 1.05
GSC2O15499 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
GSC2O15499 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GSC2O15499 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
GSC2O15499 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GSC2O15499 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GSC2O15499 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
GSC2O15499 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
GSC2O15499 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
GSC2O15499 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
GSC2O15499 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GSC2O15499 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GSC2O15499 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GSC2O15499 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GSC2O15499 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.63■■□□□ 1.05
GSC2O15499 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GSC2O15499 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GSC2O15499 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GSC2O15499 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.62■■□□□ 1.05
GSC2O15499 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GSC2O15499 AC079630.1-202ENST00000618127 1840 ntBASIC21.62■■□□□ 1.05
GSC2O15499 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
GSC2O15499 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GSC2O15499 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
GSC2O15499 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
GSC2O15499 SMPD5-203ENST00000639008 1464 ntBASIC21.62■■□□□ 1.05
GSC2O15499 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GSC2O15499 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.62■■□□□ 1.05
GSC2O15499 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GSC2O15499 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
GSC2O15499 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GSC2O15499 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
GSC2O15499 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GSC2O15499 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GSC2O15499 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
GSC2O15499 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GSC2O15499 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GSC2O15499 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
GSC2O15499 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GSC2O15499 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.61■■□□□ 1.05
GSC2O15499 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GSC2O15499 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
GSC2O15499 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
GSC2O15499 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.6■■□□□ 1.05
GSC2O15499 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
GSC2O15499 RPS2P35-201ENST00000443417 897 ntBASIC21.6■■□□□ 1.05
GSC2O15499 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.6■■□□□ 1.05
GSC2O15499 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.6■■□□□ 1.05
GSC2O15499 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
GSC2O15499 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.6■■□□□ 1.05
GSC2O15499 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
GSC2O15499 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GSC2O15499 AC080038.3-201ENST00000623346 1952 ntBASIC21.59■■□□□ 1.05
GSC2O15499 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
GSC2O15499 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
GSC2O15499 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.59■■□□□ 1.05
GSC2O15499 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GSC2O15499 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
GSC2O15499 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.59■■□□□ 1.05
GSC2O15499 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.59■■□□□ 1.05
GSC2O15499 AL121603.2-201ENST00000557373 2117 ntBASIC21.59■■□□□ 1.05
GSC2O15499 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.59■■□□□ 1.05
GSC2O15499 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
GSC2O15499 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GSC2O15499 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
GSC2O15499 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GSC2O15499 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms