Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.32■■□□□ 1.96
SEMA3EO15041 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.32■■□□□ 1.96
SEMA3EO15041 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.32■■□□□ 1.96
SEMA3EO15041 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
SEMA3EO15041 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.32■■□□□ 1.96
SEMA3EO15041 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
SEMA3EO15041 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.31■■□□□ 1.96
SEMA3EO15041 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SEMA3EO15041 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
SEMA3EO15041 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SEMA3EO15041 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
SEMA3EO15041 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SEMA3EO15041 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
SEMA3EO15041 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SEMA3EO15041 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.3■■□□□ 1.96
SEMA3EO15041 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.3■■□□□ 1.96
SEMA3EO15041 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.3■■□□□ 1.96
SEMA3EO15041 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.3■■□□□ 1.96
SEMA3EO15041 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.3■■□□□ 1.96
SEMA3EO15041 AC008764.7-201ENST00000593779 1081 ntBASIC27.3■■□□□ 1.96
SEMA3EO15041 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SEMA3EO15041 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.3■■□□□ 1.96
SEMA3EO15041 AL139125.2-201ENST00000623134 1869 ntBASIC27.3■■□□□ 1.96
SEMA3EO15041 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SEMA3EO15041 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.29■■□□□ 1.96
SEMA3EO15041 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.29■■□□□ 1.96
SEMA3EO15041 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.29■■□□□ 1.96
SEMA3EO15041 AC233992.3-201ENST00000607491 485 ntBASIC27.29■■□□□ 1.96
SEMA3EO15041 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
SEMA3EO15041 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
SEMA3EO15041 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SEMA3EO15041 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SEMA3EO15041 LINC01124-201ENST00000409786 2117 ntBASIC27.29■■□□□ 1.96
SEMA3EO15041 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SEMA3EO15041 AC099791.1-201ENST00000416440 715 ntBASIC27.28■■□□□ 1.96
SEMA3EO15041 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.28■■□□□ 1.96
SEMA3EO15041 DUX4L4-201ENST00000566884 1269 ntBASIC27.28■■□□□ 1.96
SEMA3EO15041 AL499627.2-201ENST00000606283 725 ntBASIC27.28■■□□□ 1.96
SEMA3EO15041 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.28■■□□□ 1.96
SEMA3EO15041 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SEMA3EO15041 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SEMA3EO15041 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.27■■□□□ 1.96
SEMA3EO15041 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SEMA3EO15041 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SEMA3EO15041 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SEMA3EO15041 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
SEMA3EO15041 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
SEMA3EO15041 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SEMA3EO15041 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.27■■□□□ 1.96
SEMA3EO15041 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.26■■□□□ 1.96
SEMA3EO15041 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.26■■□□□ 1.96
SEMA3EO15041 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
SEMA3EO15041 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.26■■□□□ 1.95
SEMA3EO15041 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SEMA3EO15041 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SEMA3EO15041 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.26■■□□□ 1.95
SEMA3EO15041 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27.26■■□□□ 1.95
SEMA3EO15041 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SEMA3EO15041 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.26■■□□□ 1.95
SEMA3EO15041 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.26■■□□□ 1.95
SEMA3EO15041 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SEMA3EO15041 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
SEMA3EO15041 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.25■■□□□ 1.95
SEMA3EO15041 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SEMA3EO15041 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SEMA3EO15041 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SEMA3EO15041 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SEMA3EO15041 AC144652.1-201ENST00000609974 1624 ntBASIC27.24■■□□□ 1.95
SEMA3EO15041 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.24■■□□□ 1.95
SEMA3EO15041 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SEMA3EO15041 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SEMA3EO15041 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SEMA3EO15041 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SEMA3EO15041 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.23■■□□□ 1.95
SEMA3EO15041 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.23■■□□□ 1.95
SEMA3EO15041 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SEMA3EO15041 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SEMA3EO15041 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SEMA3EO15041 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.22■■□□□ 1.95
SEMA3EO15041 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SEMA3EO15041 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
SEMA3EO15041 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.22■■□□□ 1.95
SEMA3EO15041 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SEMA3EO15041 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.22■■□□□ 1.95
SEMA3EO15041 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SEMA3EO15041 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SEMA3EO15041 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
SEMA3EO15041 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
SEMA3EO15041 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
SEMA3EO15041 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SEMA3EO15041 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.2■■□□□ 1.95
SEMA3EO15041 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms