Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CLDN5O00501 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CLDN5O00501 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 PBX2P1-201ENST00000493219 1291 ntBASIC23.81■■□□□ 1.4
CLDN5O00501 AL136162.1-201ENST00000607711 1078 ntBASIC23.81■■□□□ 1.4
CLDN5O00501 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.81■■□□□ 1.4
CLDN5O00501 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CLDN5O00501 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN5O00501 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CLDN5O00501 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.8■■□□□ 1.4
CLDN5O00501 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN5O00501 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN5O00501 MIR638-201ENST00000385237 100 ntBASIC23.8■■□□□ 1.4
CLDN5O00501 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN5O00501 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN5O00501 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN5O00501 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CLDN5O00501 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CLDN5O00501 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN5O00501 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.8■■□□□ 1.4
CLDN5O00501 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN5O00501 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN5O00501 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.79■■□□□ 1.4
CLDN5O00501 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.79■■□□□ 1.4
CLDN5O00501 SERBP1P1-201ENST00000396021 1160 ntBASIC23.79■■□□□ 1.4
CLDN5O00501 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.79■■□□□ 1.4
CLDN5O00501 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN5O00501 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.78■■□□□ 1.4
CLDN5O00501 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN5O00501 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN5O00501 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN5O00501 SYT6-210ENST00000641643 1587 ntBASIC23.78■■□□□ 1.4
CLDN5O00501 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CLDN5O00501 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.78■■□□□ 1.4
CLDN5O00501 AC024257.2-201ENST00000549699 147 ntBASIC23.78■■□□□ 1.4
CLDN5O00501 AC009086.3-201ENST00000623486 1008 ntBASIC23.78■■□□□ 1.4
CLDN5O00501 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CLDN5O00501 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.77■■□□□ 1.4
CLDN5O00501 AC241377.3-202ENST00000626088 1088 ntBASIC23.77■■□□□ 1.4
CLDN5O00501 AC241585.3-202ENST00000628937 1088 ntBASIC23.77■■□□□ 1.4
CLDN5O00501 AC245100.8-202ENST00000629247 1058 ntBASIC23.77■■□□□ 1.4
CLDN5O00501 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.77■■□□□ 1.4
CLDN5O00501 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.77■■□□□ 1.4
CLDN5O00501 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN5O00501 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN5O00501 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CLDN5O00501 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CLDN5O00501 AC106739.1-201ENST00000617035 715 ntBASIC23.76■■□□□ 1.39
CLDN5O00501 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN5O00501 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN5O00501 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN5O00501 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.76■■□□□ 1.39
CLDN5O00501 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN5O00501 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN5O00501 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
CLDN5O00501 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.75■■□□□ 1.39
CLDN5O00501 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN5O00501 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN5O00501 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.75■■□□□ 1.39
CLDN5O00501 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.75■■□□□ 1.39
CLDN5O00501 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.75■■□□□ 1.39
CLDN5O00501 DUX4L19-201ENST00000557448 1267 ntBASIC23.75■■□□□ 1.39
CLDN5O00501 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CLDN5O00501 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.75■■□□□ 1.39
CLDN5O00501 AC092171.4-201ENST00000609130 632 ntBASIC23.75■■□□□ 1.39
CLDN5O00501 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN5O00501 AC135279.3-201ENST00000610945 1311 ntBASIC23.75■■□□□ 1.39
CLDN5O00501 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN5O00501 AC079630.1-202ENST00000618127 1840 ntBASIC23.75■■□□□ 1.39
CLDN5O00501 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN5O00501 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CLDN5O00501 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN5O00501 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN5O00501 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CLDN5O00501 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN5O00501 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.74■■□□□ 1.39
CLDN5O00501 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN5O00501 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN5O00501 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CLDN5O00501 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN5O00501 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN5O00501 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN5O00501 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN5O00501 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms