Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01548A6NM66 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01548A6NM66 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.78■□□□□ 0.44
LINC01548A6NM66 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01548A6NM66 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC01548A6NM66 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01548A6NM66 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC01548A6NM66 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01548A6NM66 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LINC01548A6NM66 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01548A6NM66 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01548A6NM66 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01548A6NM66 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01548A6NM66 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LINC01548A6NM66 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01548A6NM66 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
LINC01548A6NM66 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.77■□□□□ 0.44
LINC01548A6NM66 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.77■□□□□ 0.44
LINC01548A6NM66 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01548A6NM66 AC099791.2-201ENST00000605725 427 ntBASIC17.77■□□□□ 0.44
LINC01548A6NM66 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01548A6NM66 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01548A6NM66 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01548A6NM66 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.77■□□□□ 0.43
LINC01548A6NM66 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LINC01548A6NM66 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
LINC01548A6NM66 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01548A6NM66 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01548A6NM66 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.76■□□□□ 0.43
LINC01548A6NM66 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LINC01548A6NM66 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01548A6NM66 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01548A6NM66 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LINC01548A6NM66 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC01548A6NM66 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01548A6NM66 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LINC01548A6NM66 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC01548A6NM66 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01548A6NM66 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01548A6NM66 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01548A6NM66 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LINC01548A6NM66 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01548A6NM66 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01548A6NM66 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01548A6NM66 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01548A6NM66 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01548A6NM66 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LINC01548A6NM66 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
LINC01548A6NM66 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LINC01548A6NM66 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LINC01548A6NM66 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LINC01548A6NM66 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01548A6NM66 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01548A6NM66 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01548A6NM66 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01548A6NM66 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01548A6NM66 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LINC01548A6NM66 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01548A6NM66 AC096631.2-201ENST00000436136 790 ntBASIC17.73■□□□□ 0.43
LINC01548A6NM66 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.73■□□□□ 0.43
LINC01548A6NM66 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01548A6NM66 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LINC01548A6NM66 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LINC01548A6NM66 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01548A6NM66 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LINC01548A6NM66 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC01548A6NM66 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01548A6NM66 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01548A6NM66 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LINC01548A6NM66 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01548A6NM66 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01548A6NM66 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01548A6NM66 AC079630.1-202ENST00000618127 1840 ntBASIC17.72■□□□□ 0.43
LINC01548A6NM66 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01548A6NM66 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01548A6NM66 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01548A6NM66 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01548A6NM66 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01548A6NM66 AC006455.2-201ENST00000429931 906 ntBASIC17.72■□□□□ 0.43
LINC01548A6NM66 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01548A6NM66 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01548A6NM66 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01548A6NM66 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01548A6NM66 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LINC01548A6NM66 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01548A6NM66 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC01548A6NM66 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC01548A6NM66 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01548A6NM66 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC01548A6NM66 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms