Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CGB1A6NKQ9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 SNX5-217ENST00000606557 1087 ntBASIC17.94■□□□□ 0.46
CGB1A6NKQ9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CGB1A6NKQ9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 AC137630.3-201ENST00000607245 391 ntBASIC17.93■□□□□ 0.46
CGB1A6NKQ9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 AC079630.1-202ENST00000618127 1840 ntBASIC17.93■□□□□ 0.46
CGB1A6NKQ9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CGB1A6NKQ9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CGB1A6NKQ9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 AL031848.2-201ENST00000607670 837 ntBASIC17.91■□□□□ 0.46
CGB1A6NKQ9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.91■□□□□ 0.46
CGB1A6NKQ9 C1orf229-201ENST00000623686 2258 ntBASIC17.91■□□□□ 0.46
CGB1A6NKQ9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CGB1A6NKQ9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CGB1A6NKQ9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms