Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCP4L1A6NKN8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCP4L1A6NKN8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCP4L1A6NKN8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCP4L1A6NKN8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 AC090340.1-201ENST00000620778 4980 ntBASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCP4L1A6NKN8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCP4L1A6NKN8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCP4L1A6NKN8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCP4L1A6NKN8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCP4L1A6NKN8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PCP4L1A6NKN8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCP4L1A6NKN8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCP4L1A6NKN8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCP4L1A6NKN8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCP4L1A6NKN8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCP4L1A6NKN8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.75■□□□□ 0.43
PCP4L1A6NKN8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCP4L1A6NKN8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCP4L1A6NKN8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCP4L1A6NKN8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCP4L1A6NKN8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCP4L1A6NKN8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCP4L1A6NKN8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCP4L1A6NKN8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCP4L1A6NKN8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms