Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 ALDH1A3-203ENST00000557963 1670 ntBASIC19.17■□□□□ 0.66
TMEM235A6NFC5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 AC242852.2-201ENST00000615738 1807 ntBASIC19.17■□□□□ 0.66
TMEM235A6NFC5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM235A6NFC5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM235A6NFC5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 AC018755.3-202ENST00000596210 929 ntBASIC19.15■□□□□ 0.66
TMEM235A6NFC5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM235A6NFC5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.14■□□□□ 0.66
TMEM235A6NFC5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.14■□□□□ 0.66
TMEM235A6NFC5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM235A6NFC5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 SPCS2P3-201ENST00000500401 656 ntBASIC19.13■□□□□ 0.65
TMEM235A6NFC5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 AC087393.1-201ENST00000582896 145 ntBASIC19.13■□□□□ 0.65
TMEM235A6NFC5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM235A6NFC5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 ESRRAP2-201ENST00000418437 1549 ntBASIC19.12■□□□□ 0.65
TMEM235A6NFC5 AC131274.2-201ENST00000580697 1507 ntBASIC19.12■□□□□ 0.65
TMEM235A6NFC5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM235A6NFC5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TMEM235A6NFC5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM235A6NFC5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM235A6NFC5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM235A6NFC5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM235A6NFC5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms