Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 MIR6722-201ENST00000617286 78 ntBASIC20.7■□□□□ 0.9
CDHR4A6H8M9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDHR4A6H8M9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 Z92544.1-202ENST00000571933 1220 ntBASIC20.68■□□□□ 0.9
CDHR4A6H8M9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.68■□□□□ 0.9
CDHR4A6H8M9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDHR4A6H8M9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDHR4A6H8M9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDHR4A6H8M9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDHR4A6H8M9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDHR4A6H8M9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDHR4A6H8M9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.67■□□□□ 0.9
CDHR4A6H8M9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDHR4A6H8M9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDHR4A6H8M9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.66■□□□□ 0.9
CDHR4A6H8M9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.66■□□□□ 0.9
CDHR4A6H8M9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CDHR4A6H8M9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDHR4A6H8M9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDHR4A6H8M9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDHR4A6H8M9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 KRT125P-201ENST00000546827 989 ntBASIC20.65■□□□□ 0.9
CDHR4A6H8M9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 AC092028.1-203ENST00000608262 953 ntBASIC20.65■□□□□ 0.9
CDHR4A6H8M9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDHR4A6H8M9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDHR4A6H8M9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDHR4A6H8M9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.64■□□□□ 0.89
CDHR4A6H8M9 AC005703.6-201ENST00000623265 1329 ntBASIC20.64■□□□□ 0.89
CDHR4A6H8M9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDHR4A6H8M9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDHR4A6H8M9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDHR4A6H8M9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.64■□□□□ 0.89
CDHR4A6H8M9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.64■□□□□ 0.89
CDHR4A6H8M9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDHR4A6H8M9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDHR4A6H8M9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CDHR4A6H8M9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.63■□□□□ 0.89
CDHR4A6H8M9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CDHR4A6H8M9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.63■□□□□ 0.89
CDHR4A6H8M9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.63■□□□□ 0.89
CDHR4A6H8M9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDHR4A6H8M9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDHR4A6H8M9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms