Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.68■■□□□ 1.86
SSC5DA1L4H1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SSC5DA1L4H1 ALDH1A3-203ENST00000557963 1670 ntBASIC26.68■■□□□ 1.86
SSC5DA1L4H1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SSC5DA1L4H1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.68■■□□□ 1.86
SSC5DA1L4H1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SSC5DA1L4H1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.68■■□□□ 1.86
SSC5DA1L4H1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
SSC5DA1L4H1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.67■■□□□ 1.86
SSC5DA1L4H1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SSC5DA1L4H1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SSC5DA1L4H1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
SSC5DA1L4H1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SSC5DA1L4H1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 KRT18P61-201ENST00000585825 1298 ntBASIC26.66■■□□□ 1.86
SSC5DA1L4H1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
SSC5DA1L4H1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.65■■□□□ 1.86
SSC5DA1L4H1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SSC5DA1L4H1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.64■■□□□ 1.86
SSC5DA1L4H1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.64■■□□□ 1.86
SSC5DA1L4H1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SSC5DA1L4H1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SSC5DA1L4H1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.64■■□□□ 1.86
SSC5DA1L4H1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SSC5DA1L4H1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
SSC5DA1L4H1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
SSC5DA1L4H1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.63■■□□□ 1.85
SSC5DA1L4H1 AC133637.1-201ENST00000624115 1537 ntBASIC26.63■■□□□ 1.85
SSC5DA1L4H1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SSC5DA1L4H1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.63■■□□□ 1.85
SSC5DA1L4H1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SSC5DA1L4H1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SSC5DA1L4H1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SSC5DA1L4H1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SSC5DA1L4H1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.62■■□□□ 1.85
SSC5DA1L4H1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SSC5DA1L4H1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SSC5DA1L4H1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.62■■□□□ 1.85
SSC5DA1L4H1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SSC5DA1L4H1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
SSC5DA1L4H1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SSC5DA1L4H1 NTF6G-201ENST00000591094 616 ntBASIC26.61■■□□□ 1.85
SSC5DA1L4H1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SSC5DA1L4H1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SSC5DA1L4H1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SSC5DA1L4H1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.6■■□□□ 1.85
SSC5DA1L4H1 OR2I1P-207ENST00000453522 948 ntBASIC26.6■■□□□ 1.85
SSC5DA1L4H1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.6■■□□□ 1.85
SSC5DA1L4H1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SSC5DA1L4H1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.6■■□□□ 1.85
SSC5DA1L4H1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.6■■□□□ 1.85
SSC5DA1L4H1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SSC5DA1L4H1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
SSC5DA1L4H1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 AL499627.2-201ENST00000606283 725 ntBASIC26.59■■□□□ 1.85
SSC5DA1L4H1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.59■■□□□ 1.85
SSC5DA1L4H1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SSC5DA1L4H1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.58■■□□□ 1.85
SSC5DA1L4H1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.58■■□□□ 1.85
SSC5DA1L4H1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SSC5DA1L4H1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
SSC5DA1L4H1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.58■■□□□ 1.85
SSC5DA1L4H1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SSC5DA1L4H1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SSC5DA1L4H1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.57■■□□□ 1.84
SSC5DA1L4H1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SSC5DA1L4H1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SSC5DA1L4H1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SSC5DA1L4H1 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.57■■□□□ 1.84
SSC5DA1L4H1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.57■■□□□ 1.84
SSC5DA1L4H1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.57■■□□□ 1.84
SSC5DA1L4H1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.57■■□□□ 1.84
SSC5DA1L4H1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.57■■□□□ 1.84
SSC5DA1L4H1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SSC5DA1L4H1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SSC5DA1L4H1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms