Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 DYNLL1-208ENST00000550178 581 ntBASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 LETM1P2-201ENST00000597330 2178 ntBASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 AL133380.1-201ENST00000506013 324 ntBASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM238LA0A1B0GVL6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 C8orf49-201ENST00000525043 1968 ntBASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 AC026471.1-201ENST00000564629 3026 ntBASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM238LA0A1B0GVL6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TMEM238LA0A1B0GVL6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM238LA0A1B0GVL6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM238LA0A1B0GVL6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TMEM238LA0A1B0GVL6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM238LA0A1B0GVL6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM238LA0A1B0GVL6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TMEM238LA0A1B0GVL6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEM238LA0A1B0GVL6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM238LA0A1B0GVL6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM238LA0A1B0GVL6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms