Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PNMA6EA0A0J9YXQ4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.05■■■□□ 2.08
PNMA6EA0A0J9YXQ4 ANOS2P-203ENST00000472227 1816 ntBASIC28.05■■■□□ 2.08
PNMA6EA0A0J9YXQ4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
PNMA6EA0A0J9YXQ4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PNMA6EA0A0J9YXQ4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PNMA6EA0A0J9YXQ4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PNMA6EA0A0J9YXQ4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
PNMA6EA0A0J9YXQ4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.04■■■□□ 2.08
PNMA6EA0A0J9YXQ4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
PNMA6EA0A0J9YXQ4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
PNMA6EA0A0J9YXQ4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PNMA6EA0A0J9YXQ4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.02■■■□□ 2.08
PNMA6EA0A0J9YXQ4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PNMA6EA0A0J9YXQ4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
PNMA6EA0A0J9YXQ4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.02■■■□□ 2.08
PNMA6EA0A0J9YXQ4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PNMA6EA0A0J9YXQ4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.02■■■□□ 2.08
PNMA6EA0A0J9YXQ4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PNMA6EA0A0J9YXQ4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.01■■■□□ 2.07
PNMA6EA0A0J9YXQ4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
PNMA6EA0A0J9YXQ4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
PNMA6EA0A0J9YXQ4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
PNMA6EA0A0J9YXQ4 AL136116.3-201ENST00000402907 1138 ntBASIC28■■■□□ 2.07
PNMA6EA0A0J9YXQ4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28■■■□□ 2.07
PNMA6EA0A0J9YXQ4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28■■■□□ 2.07
PNMA6EA0A0J9YXQ4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
PNMA6EA0A0J9YXQ4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
PNMA6EA0A0J9YXQ4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PNMA6EA0A0J9YXQ4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.98■■■□□ 2.07
PNMA6EA0A0J9YXQ4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PNMA6EA0A0J9YXQ4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PNMA6EA0A0J9YXQ4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.98■■■□□ 2.07
PNMA6EA0A0J9YXQ4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.98■■■□□ 2.07
PNMA6EA0A0J9YXQ4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.98■■■□□ 2.07
PNMA6EA0A0J9YXQ4 AC008406.3-201ENST00000620001 1374 ntBASIC27.98■■■□□ 2.07
PNMA6EA0A0J9YXQ4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PNMA6EA0A0J9YXQ4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 AC144652.1-201ENST00000609974 1624 ntBASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PNMA6EA0A0J9YXQ4 AC092068.2-201ENST00000590491 1708 ntBASIC27.95■■■□□ 2.07
PNMA6EA0A0J9YXQ4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PNMA6EA0A0J9YXQ4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.95■■■□□ 2.06
PNMA6EA0A0J9YXQ4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
PNMA6EA0A0J9YXQ4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
PNMA6EA0A0J9YXQ4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PNMA6EA0A0J9YXQ4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
PNMA6EA0A0J9YXQ4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.94■■■□□ 2.06
PNMA6EA0A0J9YXQ4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PNMA6EA0A0J9YXQ4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PNMA6EA0A0J9YXQ4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.94■■■□□ 2.06
PNMA6EA0A0J9YXQ4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 AC006455.2-201ENST00000429931 906 ntBASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 AC099791.2-201ENST00000605725 427 ntBASIC27.93■■■□□ 2.06
PNMA6EA0A0J9YXQ4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms