Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 LSR-205ENST00000427250 1606 ntTSL 2 BASIC12.77□□□□□ -0.36
TRAV22A0A0B4J277 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV22A0A0B4J277 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV22A0A0B4J277 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV22A0A0B4J277 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV22A0A0B4J277 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 BID-212ENST00000614949 1988 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV22A0A0B4J277 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 ANOS2P-203ENST00000472227 1816 ntBASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 AC108673.1-201ENST00000510422 1159 ntBASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 AC242852.2-201ENST00000615738 1807 ntBASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV22A0A0B4J277 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 AC007952.6-201ENST00000573168 2673 ntBASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 AC003957.1-201ENST00000625108 2673 ntBASIC12.74□□□□□ -0.37
TRAV22A0A0B4J277 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 AC092068.2-201ENST00000590491 1708 ntBASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV22A0A0B4J277 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms