Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-2A0A0B4J237 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-2A0A0B4J237 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-2A0A0B4J237 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-2A0A0B4J237 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 KRT8P33-201ENST00000508125 1423 ntBASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-2A0A0B4J237 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-2A0A0B4J237 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-2A0A0B4J237 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 AC103724.3-201ENST00000564481 992 ntBASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-2A0A0B4J237 C1orf229-201ENST00000623686 2258 ntBASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17■□□□□ 0.31
TRAV8-2A0A0B4J237 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 AC079630.1-202ENST00000618127 1840 ntBASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 AC079834.2-201ENST00000609776 1949 ntBASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-2A0A0B4J237 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms