Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRBV19A0A075B6N1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 AC079630.1-202ENST00000618127 1840 ntBASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV19A0A075B6N1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 AC242852.2-201ENST00000615738 1807 ntBASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV19A0A075B6N1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 KRT18P60-201ENST00000312876 1297 ntBASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV19A0A075B6N1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 AC139795.1-202ENST00000500444 432 ntBASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV19A0A075B6N1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRBV19A0A075B6N1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 AC137767.1-201ENST00000602918 1920 ntBASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV19A0A075B6N1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV19A0A075B6N1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms