Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 E2F3P2-201ENST00000447755 1422 ntBASIC13.35□□□□□ -0.27
IFT52Q9Y366 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.35□□□□□ -0.27
IFT52Q9Y366 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFT52Q9Y366 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 KLF2P4-201ENST00000451959 1225 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 AP006547.1-201ENST00000563435 692 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 AC106886.1-201ENST00000568660 600 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 AC009884.2-201ENST00000603110 324 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 AC008687.7-202ENST00000637404 953 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 AL008718.2-201ENST00000609206 1313 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IFT52Q9Y366 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 PDIA3P1-201ENST00000471856 1510 ntBASIC13.34□□□□□ -0.27
IFT52Q9Y366 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.34□□□□□ -0.27
IFT52Q9Y366 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
IFT52Q9Y366 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
IFT52Q9Y366 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
IFT52Q9Y366 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFT52Q9Y366 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms