Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 E2F3P2-201ENST00000447755 1422 ntBASIC15.81■□□□□ 0.12
CBX8Q9HC52 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 C2-209ENST00000452323 1999 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 KRT8P4-201ENST00000509735 1454 ntBASIC15.81■□□□□ 0.12
CBX8Q9HC52 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 AC124068.2-201ENST00000569473 1109 ntBASIC15.81■□□□□ 0.12
CBX8Q9HC52 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 AC015819.3-201ENST00000624305 2674 ntBASIC15.8■□□□□ 0.12
CBX8Q9HC52 LINC00115-201ENST00000473798 1317 ntBASIC15.8■□□□□ 0.12
CBX8Q9HC52 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 FAM197Y7-201ENST00000432892 766 ntBASIC15.8■□□□□ 0.12
CBX8Q9HC52 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.8■□□□□ 0.12
CBX8Q9HC52 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CBX8Q9HC52 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX8Q9HC52 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 AC008620.2-201ENST00000510294 1569 ntBASIC15.79■□□□□ 0.12
CBX8Q9HC52 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 CHMP1AP1-201ENST00000445563 662 ntBASIC15.79■□□□□ 0.12
CBX8Q9HC52 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 AC022217.1-201ENST00000521069 738 ntBASIC15.79■□□□□ 0.12
CBX8Q9HC52 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 AC132192.2-201ENST00000596206 1147 ntBASIC15.79■□□□□ 0.12
CBX8Q9HC52 AC010319.3-201ENST00000597028 470 ntBASIC15.79■□□□□ 0.12
CBX8Q9HC52 AC009955.4-201ENST00000597192 544 ntBASIC15.79■□□□□ 0.12
CBX8Q9HC52 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.79■□□□□ 0.12
CBX8Q9HC52 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CBX8Q9HC52 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CBX8Q9HC52 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms