Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S1Q92572 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S1Q92572 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.5□□□□□ -0.41
AP3S1Q92572 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S1Q92572 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.5□□□□□ -0.41
AP3S1Q92572 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.5□□□□□ -0.41
AP3S1Q92572 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.5□□□□□ -0.41
AP3S1Q92572 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.5□□□□□ -0.41
AP3S1Q92572 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.5□□□□□ -0.41
AP3S1Q92572 SPDYE12P-201ENST00000618416 771 ntBASIC12.5□□□□□ -0.41
AP3S1Q92572 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
AP3S1Q92572 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 HSPA8P9-201ENST00000485881 1943 ntBASIC12.5□□□□□ -0.41
AP3S1Q92572 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S1Q92572 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
AP3S1Q92572 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
AP3S1Q92572 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP3S1Q92572 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S1Q92572 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S1Q92572 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S1Q92572 RCC2P1-201ENST00000452257 1476 ntBASIC12.49□□□□□ -0.41
AP3S1Q92572 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
AP3S1Q92572 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 SNORA50C-201ENST00000408535 133 ntBASIC12.49□□□□□ -0.41
AP3S1Q92572 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.49□□□□□ -0.41
AP3S1Q92572 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S1Q92572 CEND1P1-201ENST00000451006 455 ntBASIC12.49□□□□□ -0.41
AP3S1Q92572 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S1Q92572 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S1Q92572 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.49□□□□□ -0.41
AP3S1Q92572 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.49□□□□□ -0.41
AP3S1Q92572 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S1Q92572 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.49□□□□□ -0.41
AP3S1Q92572 SPDYE22P-201ENST00000582158 798 ntBASIC12.49□□□□□ -0.41
AP3S1Q92572 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S1Q92572 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S1Q92572 AL138828.2-201ENST00000615812 383 ntBASIC12.49□□□□□ -0.41
AP3S1Q92572 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.49□□□□□ -0.41
AP3S1Q92572 SNORA50.1-201ENST00000628590 135 ntBASIC12.49□□□□□ -0.41
AP3S1Q92572 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S1Q92572 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S1Q92572 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.49□□□□□ -0.41
AP3S1Q92572 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
AP3S1Q92572 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
AP3S1Q92572 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S1Q92572 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.49□□□□□ -0.41
AP3S1Q92572 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S1Q92572 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.48□□□□□ -0.41
AP3S1Q92572 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S1Q92572 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms