Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC006987.1-201ENST00000413610 527 ntBASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 SCARNA12-201ENST00000459155 270 ntBASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC005740.1-201ENST00000515639 522 ntBASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 RN7SL357P-201ENST00000581065 298 ntBASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC140113.1-201ENST00000603467 169 ntBASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHKBP1Q8TBC3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHKBP1Q8TBC3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SHKBP1Q8TBC3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.83□□□□□ -0.03
SHKBP1Q8TBC3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.83□□□□□ -0.03
SHKBP1Q8TBC3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHKBP1Q8TBC3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 BAK1P1-201ENST00000317045 636 ntBASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHKBP1Q8TBC3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 Z82170.1-201ENST00000625081 3192 ntBASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
SHKBP1Q8TBC3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms