Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMARCC2Q8TAQ2 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 AL365181.3-201ENST00000605886 3222 ntBASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 FRMPD2B-201ENST00000431305 1347 ntBASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 UPF3AP2-201ENST00000457924 1132 ntBASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 RN7SL574P-201ENST00000581512 297 ntBASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 AC025183.3-201ENST00000623526 1482 ntBASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMARCC2Q8TAQ2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 LINC01165-201ENST00000445190 1623 ntBASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 AC073150.1-201ENST00000450406 1084 ntBASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 AL353637.1-201ENST00000451571 732 ntBASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 CHMP4BP1-201ENST00000556017 588 ntBASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 FGFR3P5-201ENST00000564496 886 ntBASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 AC020922.3-201ENST00000595064 547 ntBASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMARCC2Q8TAQ2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 AC073869.1-201ENST00000415574 2762 ntBASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 PDIA3P2-201ENST00000428073 158 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms