Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 AC079250.1-201ENST00000456046 531 ntBASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 AC078814.4-201ENST00000546650 327 ntBASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 MIR5001-201ENST00000580185 100 ntBASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 AP002414.2-201ENST00000591780 3365 ntBASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NPAS4Q8IUM7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 OR10N1P-201ENST00000392758 869 ntBASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AC104961.1-201ENST00000427605 771 ntBASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 RCC2P1-201ENST00000452257 1476 ntBASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.95□□□□□ -0.02
NPAS4Q8IUM7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms