Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.83□□□□□ -0.36
ATG4DQ86TL0 CICP17-201ENST00000418553 2377 ntBASIC12.83□□□□□ -0.36
ATG4DQ86TL0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 AC008620.2-201ENST00000510294 1569 ntBASIC12.82□□□□□ -0.36
ATG4DQ86TL0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 FMO6P-201ENST00000236166 1620 ntBASIC12.82□□□□□ -0.36
ATG4DQ86TL0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 OR8T1P-201ENST00000421347 918 ntBASIC12.82□□□□□ -0.36
ATG4DQ86TL0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 RN7SL11P-201ENST00000471305 293 ntBASIC12.82□□□□□ -0.36
ATG4DQ86TL0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 AC116345.2-201ENST00000512837 523 ntBASIC12.82□□□□□ -0.36
ATG4DQ86TL0 RHOQP1-201ENST00000555758 579 ntBASIC12.82□□□□□ -0.36
ATG4DQ86TL0 CHMP4BP1-201ENST00000556017 588 ntBASIC12.82□□□□□ -0.36
ATG4DQ86TL0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 AC026740.1-201ENST00000607068 791 ntBASIC12.82□□□□□ -0.36
ATG4DQ86TL0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATG4DQ86TL0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 AC073869.1-201ENST00000415574 2762 ntBASIC12.81□□□□□ -0.36
ATG4DQ86TL0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 AC120057.1-201ENST00000483947 663 ntBASIC12.81□□□□□ -0.36
ATG4DQ86TL0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.81□□□□□ -0.36
ATG4DQ86TL0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms