Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 PUDPP3-201ENST00000445368 636 ntBASIC13.36□□□□□ -0.27
LPCAT4Q643R3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.36□□□□□ -0.27
LPCAT4Q643R3 AL138828.2-201ENST00000615812 383 ntBASIC13.36□□□□□ -0.27
LPCAT4Q643R3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AL354861.3-201ENST00000600140 2412 ntBASIC13.35□□□□□ -0.27
LPCAT4Q643R3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AP000344.2-201ENST00000512987 629 ntBASIC13.35□□□□□ -0.27
LPCAT4Q643R3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AP001582.1-201ENST00000525856 295 ntBASIC13.35□□□□□ -0.27
LPCAT4Q643R3 ZNF890P-202ENST00000530367 1156 ntBASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AL512356.2-201ENST00000546955 174 ntBASIC13.35□□□□□ -0.27
LPCAT4Q643R3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AC004835.2-201ENST00000603762 682 ntBASIC13.35□□□□□ -0.27
LPCAT4Q643R3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LPCAT4Q643R3 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.34□□□□□ -0.27
LPCAT4Q643R3 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LPCAT4Q643R3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms