Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.05■□□□□ -0
VARS2Q5ST30 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
VARS2Q5ST30 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
VARS2Q5ST30 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VARS2Q5ST30 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VARS2Q5ST30 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.04■□□□□ -0
VARS2Q5ST30 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC15.04■□□□□ -0
VARS2Q5ST30 RPS3AP29-201ENST00000437728 769 ntBASIC15.04■□□□□ -0
VARS2Q5ST30 CT45A11P-201ENST00000448043 1134 ntBASIC15.04■□□□□ -0
VARS2Q5ST30 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC15.04■□□□□ -0
VARS2Q5ST30 AC010234.1-201ENST00000494599 870 ntBASIC15.04■□□□□ -0
VARS2Q5ST30 RN7SL564P-201ENST00000496309 250 ntBASIC15.04■□□□□ -0
VARS2Q5ST30 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC15.04■□□□□ -0
VARS2Q5ST30 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC15.04■□□□□ -0
VARS2Q5ST30 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC15.04■□□□□ -0
VARS2Q5ST30 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
VARS2Q5ST30 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.04■□□□□ -0
VARS2Q5ST30 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VARS2Q5ST30 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.04■□□□□ -0
VARS2Q5ST30 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.04■□□□□ -0
VARS2Q5ST30 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VARS2Q5ST30 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.04■□□□□ -0
VARS2Q5ST30 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.03■□□□□ -0
VARS2Q5ST30 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.03■□□□□ -0
VARS2Q5ST30 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
VARS2Q5ST30 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC15.03■□□□□ -0
VARS2Q5ST30 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.03■□□□□ -0
VARS2Q5ST30 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 TUBB8P4-201ENST00000511806 1324 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 HMGA1P1-201ENST00000415560 1062 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 PIN4P1-201ENST00000451079 396 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.03■□□□□ -0
VARS2Q5ST30 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.03■□□□□ -0
VARS2Q5ST30 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 ADAM20P2-201ENST00000515830 1273 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.03■□□□□ -0
VARS2Q5ST30 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.03■□□□□ -0
VARS2Q5ST30 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC15.03■□□□□ -0
VARS2Q5ST30 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms