Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.99□□□□□ -0.49
SSBP1Q04837 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SSBP1Q04837 AC015819.3-201ENST00000624305 2674 ntBASIC11.99□□□□□ -0.49
SSBP1Q04837 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
SSBP1Q04837 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SSBP1Q04837 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SSBP1Q04837 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SSBP1Q04837 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SSBP1Q04837 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SSBP1Q04837 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SSBP1Q04837 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
SSBP1Q04837 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 FAM90A11P-201ENST00000518378 2218 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 AC008040.5-201ENST00000599781 1781 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.98□□□□□ -0.49
SSBP1Q04837 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 LINC00563-201ENST00000566370 1400 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 TSEN15P1-201ENST00000423257 515 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.98□□□□□ -0.49
SSBP1Q04837 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.98□□□□□ -0.49
SSBP1Q04837 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 AC112482.1-201ENST00000492080 688 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 AC106818.1-201ENST00000623223 3242 ntBASIC11.98□□□□□ -0.49
SSBP1Q04837 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SSBP1Q04837 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
SSBP1Q04837 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.98□□□□□ -0.49
SSBP1Q04837 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSBP1Q04837 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 AC027369.3-201ENST00000530465 3707 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 AP001972.5-201ENST00000624624 2338 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms