Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP7AQ04656 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC20.2■□□□□ 0.82
ATP7AQ04656 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP7AQ04656 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP7AQ04656 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC20.2■□□□□ 0.82
ATP7AQ04656 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP7AQ04656 AC136475.7-201ENST00000602949 592 ntBASIC20.2■□□□□ 0.82
ATP7AQ04656 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP7AQ04656 SNORA50.1-201ENST00000628590 135 ntBASIC20.2■□□□□ 0.82
ATP7AQ04656 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP7AQ04656 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP7AQ04656 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ATP7AQ04656 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP7AQ04656 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 RPL4P6-201ENST00000438116 1304 ntBASIC20.19■□□□□ 0.82
ATP7AQ04656 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP7AQ04656 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP7AQ04656 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP7AQ04656 DBET-201ENST00000630918 3363 ntBASIC20.19■□□□□ 0.82
ATP7AQ04656 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 CASP2-203ENST00000392925 616 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP7AQ04656 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP7AQ04656 TULP3P1-202ENST00000453253 1291 ntBASIC20.19■□□□□ 0.82
ATP7AQ04656 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP7AQ04656 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP7AQ04656 AC211476.2-201ENST00000608799 708 ntBASIC20.19■□□□□ 0.82
ATP7AQ04656 AC092535.4-201ENST00000609548 397 ntBASIC20.19■□□□□ 0.82
ATP7AQ04656 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP7AQ04656 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP7AQ04656 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
ATP7AQ04656 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP7AQ04656 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP7AQ04656 AL157832.2-205ENST00000597245 1649 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 ATF4P4-201ENST00000393544 1930 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ATP7AQ04656 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP7AQ04656 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 DUX4L31-201ENST00000446466 1136 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 AL161727.1-201ENST00000457409 530 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 RN7SL794P-201ENST00000469816 280 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 AC104115.1-201ENST00000484005 623 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP7AQ04656 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP7AQ04656 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ATP7AQ04656 AC009812.1-201ENST00000605948 1059 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 AC254633.1-201ENST00000606790 345 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 DLX4-206ENST00000611342 1662 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 CROT-203ENST00000419147 2959 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP7AQ04656 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 AC008038.1-201ENST00000634247 1314 ntBASIC20.18■□□□□ 0.82
ATP7AQ04656 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP7AQ04656 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP7AQ04656 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP7AQ04656 SAP18P2-201ENST00000434334 459 ntBASIC20.17■□□□□ 0.82
ATP7AQ04656 RPE-208ENST00000436630 1128 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP7AQ04656 HNRNPA1P3-201ENST00000440968 551 ntBASIC20.17■□□□□ 0.82
ATP7AQ04656 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP7AQ04656 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP7AQ04656 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP7AQ04656 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP7AQ04656 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP7AQ04656 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP7AQ04656 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC20.17■□□□□ 0.82
ATP7AQ04656 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP7AQ04656 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.17■□□□□ 0.82
ATP7AQ04656 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP7AQ04656 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP7AQ04656 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP7AQ04656 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP7AQ04656 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP7AQ04656 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms