Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 KRT8P28-201ENST00000433288 1390 ntBASIC12.25□□□□□ -0.45
ACTBP60709 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.25□□□□□ -0.45
ACTBP60709 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.25□□□□□ -0.45
ACTBP60709 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ACTBP60709 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 GHET1-201ENST00000627071 1906 ntBASIC12.25□□□□□ -0.45
ACTBP60709 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.25□□□□□ -0.45
ACTBP60709 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.25□□□□□ -0.45
ACTBP60709 AC004623.1-201ENST00000624592 2127 ntBASIC12.25□□□□□ -0.45
ACTBP60709 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.25□□□□□ -0.45
ACTBP60709 AC060814.4-201ENST00000594169 2163 ntBASIC12.25□□□□□ -0.45
ACTBP60709 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.25□□□□□ -0.45
ACTBP60709 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.25□□□□□ -0.45
ACTBP60709 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ACTBP60709 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ACTBP60709 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 AL162726.2-201ENST00000438986 1017 ntBASIC12.24□□□□□ -0.45
ACTBP60709 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 CRB3P1-201ENST00000449338 276 ntBASIC12.24□□□□□ -0.45
ACTBP60709 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 AC008620.2-201ENST00000510294 1569 ntBASIC12.24□□□□□ -0.45
ACTBP60709 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.24□□□□□ -0.45
ACTBP60709 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 WASH4P-201ENST00000564273 1246 ntBASIC12.24□□□□□ -0.45
ACTBP60709 AC107375.1-201ENST00000564464 2231 ntBASIC12.24□□□□□ -0.45
ACTBP60709 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 AP005019.2-201ENST00000615104 511 ntBASIC12.24□□□□□ -0.45
ACTBP60709 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 AGGF1P10-201ENST00000635005 2191 ntBASIC12.24□□□□□ -0.45
ACTBP60709 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
ACTBP60709 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ACTBP60709 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ACTBP60709 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.23□□□□□ -0.45
ACTBP60709 CICP1-201ENST00000416803 2410 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms