Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUMO3P55854 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUMO3P55854 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SUMO3P55854 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUMO3P55854 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUMO3P55854 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUMO3P55854 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUMO3P55854 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SUMO3P55854 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.78□□□□□ -0.36
SUMO3P55854 AC025183.3-201ENST00000623526 1482 ntBASIC12.78□□□□□ -0.36
SUMO3P55854 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SUMO3P55854 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SUMO3P55854 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SUMO3P55854 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUMO3P55854 AL031595.1-201ENST00000623969 4709 ntBASIC12.77□□□□□ -0.36
SUMO3P55854 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUMO3P55854 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUMO3P55854 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SUMO3P55854 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUMO3P55854 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SUMO3P55854 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SUMO3P55854 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.77□□□□□ -0.36
SUMO3P55854 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SUMO3P55854 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.77□□□□□ -0.37
SUMO3P55854 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.77□□□□□ -0.37
SUMO3P55854 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SUMO3P55854 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SUMO3P55854 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.77□□□□□ -0.37
SUMO3P55854 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SUMO3P55854 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.77□□□□□ -0.37
SUMO3P55854 RN7SL67P-201ENST00000492147 296 ntBASIC12.77□□□□□ -0.37
SUMO3P55854 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.77□□□□□ -0.37
SUMO3P55854 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.77□□□□□ -0.37
SUMO3P55854 RN7SL574P-201ENST00000581512 297 ntBASIC12.77□□□□□ -0.37
SUMO3P55854 AC007326.1-201ENST00000604539 458 ntBASIC12.77□□□□□ -0.37
SUMO3P55854 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.77□□□□□ -0.37
SUMO3P55854 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SUMO3P55854 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.77□□□□□ -0.37
SUMO3P55854 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SUMO3P55854 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.77□□□□□ -0.37
SUMO3P55854 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 AC126335.2-201ENST00000623362 4637 ntBASIC12.77□□□□□ -0.37
SUMO3P55854 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
SUMO3P55854 ABCD1P2-201ENST00000429313 1601 ntBASIC12.77□□□□□ -0.37
SUMO3P55854 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.77□□□□□ -0.37
SUMO3P55854 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SUMO3P55854 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.76□□□□□ -0.37
SUMO3P55854 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.76□□□□□ -0.37
SUMO3P55854 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 NCLP1-201ENST00000445357 1963 ntBASIC12.76□□□□□ -0.37
SUMO3P55854 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SUMO3P55854 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.76□□□□□ -0.37
SUMO3P55854 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.76□□□□□ -0.37
SUMO3P55854 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.76□□□□□ -0.37
SUMO3P55854 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SUMO3P55854 AL583805.1-201ENST00000391389 531 ntBASIC12.76□□□□□ -0.37
SUMO3P55854 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.76□□□□□ -0.37
SUMO3P55854 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.76□□□□□ -0.37
SUMO3P55854 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.76□□□□□ -0.37
SUMO3P55854 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SUMO3P55854 RPL18AP8-201ENST00000486071 528 ntBASIC12.76□□□□□ -0.37
SUMO3P55854 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.76□□□□□ -0.37
SUMO3P55854 AC245884.6-201ENST00000515672 1067 ntBASIC12.76□□□□□ -0.37
SUMO3P55854 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.76□□□□□ -0.37
SUMO3P55854 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.76□□□□□ -0.37
SUMO3P55854 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SUMO3P55854 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms