Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 TMCO5B-205ENST00000530020 894 ntBASIC12.82□□□□□ -0.36
CASP6P55212 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 C2orf69P1-201ENST00000563532 1093 ntBASIC12.82□□□□□ -0.36
CASP6P55212 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.82□□□□□ -0.36
CASP6P55212 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 AC006372.4-201ENST00000624122 1543 ntBASIC12.82□□□□□ -0.36
CASP6P55212 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CASP6P55212 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.82□□□□□ -0.36
CASP6P55212 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.82□□□□□ -0.36
CASP6P55212 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CASP6P55212 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 KHSRPP1-201ENST00000427983 1768 ntBASIC12.81□□□□□ -0.36
CASP6P55212 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CASP6P55212 LAP3P2-201ENST00000454686 1454 ntBASIC12.81□□□□□ -0.36
CASP6P55212 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CASP6P55212 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 MIR645-201ENST00000385283 94 ntBASIC12.81□□□□□ -0.36
CASP6P55212 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CASP6P55212 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 AC006987.1-201ENST00000413610 527 ntBASIC12.81□□□□□ -0.36
CASP6P55212 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 GCSHP3-201ENST00000431120 391 ntBASIC12.81□□□□□ -0.36
CASP6P55212 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.81□□□□□ -0.36
CASP6P55212 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.81□□□□□ -0.36
CASP6P55212 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.81□□□□□ -0.36
CASP6P55212 LINC00431-202ENST00000636375 159 ntBASIC12.81□□□□□ -0.36
CASP6P55212 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CASP6P55212 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.81□□□□□ -0.36
CASP6P55212 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CASP6P55212 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CASP6P55212 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.8□□□□□ -0.36
CASP6P55212 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.8□□□□□ -0.36
CASP6P55212 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.8□□□□□ -0.36
CASP6P55212 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.8□□□□□ -0.36
CASP6P55212 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.8□□□□□ -0.36
CASP6P55212 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CASP6P55212 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms