Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AL512310.5-201ENST00000551999 515 ntBASIC15.03■□□□□ -0
CACNA2D1P54289 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.03■□□□□ -0
CACNA2D1P54289 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.03■□□□□ -0
CACNA2D1P54289 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.03■□□□□ -0
CACNA2D1P54289 AC138894.2-201ENST00000602838 371 ntBASIC15.03■□□□□ -0
CACNA2D1P54289 AC009560.1-201ENST00000620208 434 ntBASIC15.03■□□□□ -0
CACNA2D1P54289 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CACNA2D1P54289 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.03■□□□□ -0
CACNA2D1P54289 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.03■□□□□ -0
CACNA2D1P54289 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.03■□□□□ -0
CACNA2D1P54289 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CACNA2D1P54289 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CACNA2D1P54289 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CACNA2D1P54289 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CACNA2D1P54289 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.03■□□□□ -0
CACNA2D1P54289 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.03■□□□□ -0
CACNA2D1P54289 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CACNA2D1P54289 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CACNA2D1P54289 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CACNA2D1P54289 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.03■□□□□ -0
CACNA2D1P54289 PPT1-213ENST00000641319 2388 ntBASIC15.03■□□□□ -0
CACNA2D1P54289 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CACNA2D1P54289 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.02■□□□□ -0
CACNA2D1P54289 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.02■□□□□ -0
CACNA2D1P54289 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CACNA2D1P54289 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.02■□□□□ -0
CACNA2D1P54289 AL139385.1-201ENST00000611744 3272 ntBASIC15.02■□□□□ -0
CACNA2D1P54289 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.02■□□□□ -0
CACNA2D1P54289 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.02■□□□□ -0
CACNA2D1P54289 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.02■□□□□ -0
CACNA2D1P54289 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.02■□□□□ -0
CACNA2D1P54289 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.02■□□□□ -0
CACNA2D1P54289 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.02■□□□□ -0
CACNA2D1P54289 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 MIR645-201ENST00000385283 94 ntBASIC15.02■□□□□ -0
CACNA2D1P54289 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
CACNA2D1P54289 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.02■□□□□ -0
CACNA2D1P54289 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.02■□□□□ -0
CACNA2D1P54289 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.02■□□□□ -0
CACNA2D1P54289 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.02■□□□□ -0
CACNA2D1P54289 FTH1P22-201ENST00000456305 520 ntBASIC15.02■□□□□ -0
CACNA2D1P54289 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CACNA2D1P54289 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.02■□□□□ -0
CACNA2D1P54289 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.02■□□□□ -0
CACNA2D1P54289 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CACNA2D1P54289 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.02■□□□□ -0
CACNA2D1P54289 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CACNA2D1P54289 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CACNA2D1P54289 MARK2P16-201ENST00000605714 1723 ntBASIC15.02□□□□□ -0.01
CACNA2D1P54289 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CACNA2D1P54289 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CACNA2D1P54289 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CACNA2D1P54289 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CACNA2D1P54289 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CACNA2D1P54289 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.02□□□□□ -0.01
CACNA2D1P54289 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CACNA2D1P54289 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.02□□□□□ -0.01
CACNA2D1P54289 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.02□□□□□ -0.01
CACNA2D1P54289 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.02□□□□□ -0.01
CACNA2D1P54289 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.02□□□□□ -0.01
CACNA2D1P54289 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CACNA2D1P54289 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CACNA2D1P54289 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CACNA2D1P54289 AC051619.9-201ENST00000623237 597 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms