Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC20.45■□□□□ 0.86
KDM5CP41229 NAT9-219ENST00000582524 573 ntTSL 4 BASIC20.45■□□□□ 0.86
KDM5CP41229 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC20.45■□□□□ 0.86
KDM5CP41229 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC20.45■□□□□ 0.86
KDM5CP41229 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
KDM5CP41229 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 AC020910.6-201ENST00000623084 1459 ntBASIC20.45■□□□□ 0.86
KDM5CP41229 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.45■□□□□ 0.86
KDM5CP41229 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC20.45■□□□□ 0.86
KDM5CP41229 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC20.45■□□□□ 0.86
KDM5CP41229 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 AL513497.1-201ENST00000624273 2083 ntBASIC20.44■□□□□ 0.86
KDM5CP41229 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KDM5CP41229 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC20.44■□□□□ 0.86
KDM5CP41229 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC20.44■□□□□ 0.86
KDM5CP41229 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC20.44■□□□□ 0.86
KDM5CP41229 SNORA50D-201ENST00000408059 134 ntBASIC20.44■□□□□ 0.86
KDM5CP41229 BX088651.3-201ENST00000418155 352 ntBASIC20.44■□□□□ 0.86
KDM5CP41229 HMGA1P2-201ENST00000430198 324 ntBASIC20.44■□□□□ 0.86
KDM5CP41229 RPSAP16-201ENST00000447583 821 ntBASIC20.44■□□□□ 0.86
KDM5CP41229 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KDM5CP41229 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC20.44■□□□□ 0.86
KDM5CP41229 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
KDM5CP41229 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KDM5CP41229 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC20.44■□□□□ 0.86
KDM5CP41229 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC20.44■□□□□ 0.86
KDM5CP41229 TKT-201ENST00000296289 1931 ntTSL 5 BASIC20.44■□□□□ 0.86
KDM5CP41229 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC20.44■□□□□ 0.86
KDM5CP41229 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
KDM5CP41229 LINC02228-204ENST00000642115 2962 ntBASIC20.44■□□□□ 0.86
KDM5CP41229 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDM5CP41229 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM5CP41229 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM5CP41229 DLX4-206ENST00000611342 1662 ntBASIC20.43■□□□□ 0.86
KDM5CP41229 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KDM5CP41229 AF013593.1-201ENST00000458074 1487 ntBASIC20.43■□□□□ 0.86
KDM5CP41229 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM5CP41229 IQCF4-203ENST00000428561 420 ntBASIC20.43■□□□□ 0.86
KDM5CP41229 CA5BP1-205ENST00000435806 1064 ntBASIC20.43■□□□□ 0.86
KDM5CP41229 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC20.43■□□□□ 0.86
KDM5CP41229 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC20.43■□□□□ 0.86
KDM5CP41229 YBX1P3-201ENST00000468366 909 ntBASIC20.43■□□□□ 0.86
KDM5CP41229 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC20.43■□□□□ 0.86
KDM5CP41229 AP001102.1-201ENST00000528959 409 ntBASIC20.43■□□□□ 0.86
KDM5CP41229 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC20.43■□□□□ 0.86
KDM5CP41229 AC133555.4-201ENST00000569081 152 ntBASIC20.43■□□□□ 0.86
KDM5CP41229 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
KDM5CP41229 AC022001.3-201ENST00000606330 596 ntBASIC20.43■□□□□ 0.86
KDM5CP41229 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC20.43■□□□□ 0.86
KDM5CP41229 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM5CP41229 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
KDM5CP41229 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
KDM5CP41229 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM5CP41229 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
KDM5CP41229 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
KDM5CP41229 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC20.42■□□□□ 0.86
KDM5CP41229 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC20.42■□□□□ 0.86
KDM5CP41229 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC20.42■□□□□ 0.86
KDM5CP41229 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC20.42■□□□□ 0.86
KDM5CP41229 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC20.42■□□□□ 0.86
KDM5CP41229 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC20.42■□□□□ 0.86
KDM5CP41229 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC20.42■□□□□ 0.86
KDM5CP41229 GOLGA8VP-201ENST00000559009 1798 ntBASIC20.42■□□□□ 0.86
KDM5CP41229 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC20.42■□□□□ 0.86
KDM5CP41229 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
KDM5CP41229 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDM5CP41229 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC20.42■□□□□ 0.86
KDM5CP41229 AL161727.1-201ENST00000457409 530 ntBASIC20.42■□□□□ 0.86
KDM5CP41229 RN7SL646P-201ENST00000492969 297 ntBASIC20.42■□□□□ 0.86
KDM5CP41229 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KDM5CP41229 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms