Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN1P35523 EIF3FP3-201ENST00000434851 1086 ntBASIC16.17■□□□□ 0.18
CLCN1P35523 HMGN1P19-201ENST00000436976 333 ntBASIC16.17■□□□□ 0.18
CLCN1P35523 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN1P35523 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN1P35523 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN1P35523 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.17■□□□□ 0.18
CLCN1P35523 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLCN1P35523 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLCN1P35523 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLCN1P35523 HERC2P10-201ENST00000570209 2393 ntBASIC16.17■□□□□ 0.18
CLCN1P35523 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLCN1P35523 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 AL928654.5-201ENST00000624831 2501 ntBASIC16.17■□□□□ 0.18
CLCN1P35523 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLCN1P35523 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN1P35523 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CLCN1P35523 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLCN1P35523 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN1P35523 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLCN1P35523 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLCN1P35523 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN1P35523 PKP4P1-201ENST00000426801 2158 ntBASIC16.16■□□□□ 0.18
CLCN1P35523 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN1P35523 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 ACKR1-201ENST00000368121 1240 ntBASIC16.16■□□□□ 0.18
CLCN1P35523 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN1P35523 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN1P35523 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN1P35523 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.16■□□□□ 0.18
CLCN1P35523 AC026434.2-201ENST00000506094 1078 ntBASIC16.16■□□□□ 0.18
CLCN1P35523 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN1P35523 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.16■□□□□ 0.18
CLCN1P35523 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN1P35523 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.16■□□□□ 0.18
CLCN1P35523 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.16■□□□□ 0.18
CLCN1P35523 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 AP005019.2-201ENST00000615104 511 ntBASIC16.16■□□□□ 0.18
CLCN1P35523 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CLCN1P35523 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN1P35523 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN1P35523 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN1P35523 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 AC073335.2-201ENST00000610177 3441 ntBASIC16.16■□□□□ 0.18
CLCN1P35523 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLCN1P35523 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN1P35523 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN1P35523 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN1P35523 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLCN1P35523 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN1P35523 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN1P35523 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN1P35523 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN1P35523 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 ARL4AP4-201ENST00000434170 518 ntBASIC16.15■□□□□ 0.18
CLCN1P35523 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.15■□□□□ 0.18
CLCN1P35523 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCN1P35523 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCN1P35523 TERF1P3-201ENST00000505638 1227 ntBASIC16.15■□□□□ 0.18
CLCN1P35523 AC022616.1-201ENST00000518688 554 ntBASIC16.15■□□□□ 0.18
CLCN1P35523 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.15■□□□□ 0.18
CLCN1P35523 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms