Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RFC1P35251 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.95□□□□□ -0.02
RFC1P35251 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
RFC1P35251 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RFC1P35251 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RFC1P35251 MIR3615-201ENST00000581999 87 ntBASIC14.95□□□□□ -0.02
RFC1P35251 RN7SL219P-201ENST00000582872 296 ntBASIC14.95□□□□□ -0.02
RFC1P35251 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.95□□□□□ -0.02
RFC1P35251 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.95□□□□□ -0.02
RFC1P35251 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.95□□□□□ -0.02
RFC1P35251 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RFC1P35251 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RFC1P35251 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 AL590824.1-201ENST00000403828 1349 ntBASIC14.94□□□□□ -0.02
RFC1P35251 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.94□□□□□ -0.02
RFC1P35251 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.94□□□□□ -0.02
RFC1P35251 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RFC1P35251 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFC1P35251 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RFC1P35251 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RFC1P35251 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFC1P35251 TSPY25P-201ENST00000429463 745 ntBASIC14.94□□□□□ -0.02
RFC1P35251 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.94□□□□□ -0.02
RFC1P35251 AC125604.1-201ENST00000496255 707 ntBASIC14.94□□□□□ -0.02
RFC1P35251 RCC2P8-201ENST00000502779 1035 ntBASIC14.94□□□□□ -0.02
RFC1P35251 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.94□□□□□ -0.02
RFC1P35251 AL022328.3-201ENST00000607943 679 ntBASIC14.94□□□□□ -0.02
RFC1P35251 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC1P35251 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFC1P35251 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC1P35251 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.94□□□□□ -0.02
RFC1P35251 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.94□□□□□ -0.02
RFC1P35251 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
RFC1P35251 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC1P35251 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
RFC1P35251 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.94□□□□□ -0.02
RFC1P35251 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC1P35251 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.93□□□□□ -0.02
RFC1P35251 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFC1P35251 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFC1P35251 AC073869.1-201ENST00000415574 2762 ntBASIC14.93□□□□□ -0.02
RFC1P35251 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RFC1P35251 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RFC1P35251 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFC1P35251 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RFC1P35251 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms