Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
RXRBP28702 ATF4P4-201ENST00000393544 1930 ntBASIC17.9■□□□□ 0.46
RXRBP28702 FKBP4P7-201ENST00000433874 1363 ntBASIC17.9■□□□□ 0.46
RXRBP28702 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RXRBP28702 PCDHA14-201ENST00000506751 2298 ntBASIC17.89■□□□□ 0.46
RXRBP28702 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RXRBP28702 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RXRBP28702 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC17.89■□□□□ 0.46
RXRBP28702 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RXRBP28702 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.89■□□□□ 0.45
RXRBP28702 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.89■□□□□ 0.45
RXRBP28702 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RXRBP28702 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC17.89■□□□□ 0.45
RXRBP28702 AC253536.1-201ENST00000437021 315 ntBASIC17.89■□□□□ 0.45
RXRBP28702 IFNWP19-201ENST00000438727 566 ntBASIC17.89■□□□□ 0.45
RXRBP28702 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 RN7SL16P-201ENST00000476316 269 ntBASIC17.89■□□□□ 0.45
RXRBP28702 AP001775.1-201ENST00000532608 586 ntBASIC17.89■□□□□ 0.45
RXRBP28702 KRT18P8-201ENST00000581937 1246 ntBASIC17.89■□□□□ 0.45
RXRBP28702 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RXRBP28702 AC020763.2-201ENST00000623155 1255 ntBASIC17.89■□□□□ 0.45
RXRBP28702 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC17.89■□□□□ 0.45
RXRBP28702 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RXRBP28702 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RXRBP28702 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.89■□□□□ 0.45
RXRBP28702 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RXRBP28702 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC17.89■□□□□ 0.45
RXRBP28702 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RXRBP28702 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 ACE3P-201ENST00000423435 1973 ntBASIC17.88■□□□□ 0.45
RXRBP28702 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RXRBP28702 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RXRBP28702 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 AL021407.3-201ENST00000407522 486 ntBASIC17.88■□□□□ 0.45
RXRBP28702 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC17.88■□□□□ 0.45
RXRBP28702 GAPDHP29-201ENST00000429913 985 ntBASIC17.88■□□□□ 0.45
RXRBP28702 ACP1-207ENST00000439645 605 ntTSL 2 BASIC17.88■□□□□ 0.45
RXRBP28702 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC17.88■□□□□ 0.45
RXRBP28702 AC067942.1-202ENST00000471756 1057 ntBASIC17.88■□□□□ 0.45
RXRBP28702 MTND6P4-201ENST00000506002 522 ntBASIC17.88■□□□□ 0.45
RXRBP28702 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC17.88■□□□□ 0.45
RXRBP28702 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC17.88■□□□□ 0.45
RXRBP28702 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC17.88■□□□□ 0.45
RXRBP28702 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
RXRBP28702 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC17.88■□□□□ 0.45
RXRBP28702 AC025165.4-201ENST00000602327 433 ntBASIC17.88■□□□□ 0.45
RXRBP28702 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC17.88■□□□□ 0.45
RXRBP28702 BIN3-212ENST00000640731 450 ntTSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.88■□□□□ 0.45
RXRBP28702 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RXRBP28702 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RXRBP28702 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.88■□□□□ 0.45
RXRBP28702 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RXRBP28702 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RXRBP28702 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.87■□□□□ 0.45
RXRBP28702 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC17.87■□□□□ 0.45
RXRBP28702 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms