Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 AL354861.1-201ENST00000445213 355 ntBASIC12.19□□□□□ -0.46
CD40P25942 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 RN7SL788P-201ENST00000460504 316 ntBASIC12.19□□□□□ -0.46
CD40P25942 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 RNA5SP417-201ENST00000516459 108 ntBASIC12.19□□□□□ -0.46
CD40P25942 AP000911.2-201ENST00000534330 502 ntBASIC12.19□□□□□ -0.46
CD40P25942 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CD40P25942 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.19□□□□□ -0.46
CD40P25942 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.19□□□□□ -0.46
CD40P25942 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 AC004554.1-201ENST00000422830 1468 ntBASIC12.19□□□□□ -0.46
CD40P25942 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.19□□□□□ -0.46
CD40P25942 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.19□□□□□ -0.46
CD40P25942 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CD40P25942 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.18□□□□□ -0.46
CD40P25942 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CD40P25942 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CD40P25942 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
CD40P25942 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CD40P25942 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.18□□□□□ -0.46
CD40P25942 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.18□□□□□ -0.46
CD40P25942 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 RPL17P11-201ENST00000417593 544 ntBASIC12.18□□□□□ -0.46
CD40P25942 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.18□□□□□ -0.46
CD40P25942 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 RN7SL767P-201ENST00000493013 295 ntBASIC12.18□□□□□ -0.46
CD40P25942 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.18□□□□□ -0.46
CD40P25942 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.18□□□□□ -0.46
CD40P25942 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.18□□□□□ -0.46
CD40P25942 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.18□□□□□ -0.46
CD40P25942 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.18□□□□□ -0.46
CD40P25942 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.18□□□□□ -0.46
CD40P25942 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 U62317.3-201ENST00000608319 855 ntBASIC12.18□□□□□ -0.46
CD40P25942 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.18□□□□□ -0.46
CD40P25942 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CD40P25942 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 KRT8P43-201ENST00000406052 1458 ntBASIC12.18□□□□□ -0.46
CD40P25942 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.18□□□□□ -0.46
CD40P25942 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.18□□□□□ -0.46
CD40P25942 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD40P25942 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CD40P25942 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.18□□□□□ -0.46
CD40P25942 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms