Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
BMP4P12644 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BMP4P12644 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.12□□□□□ -0.31
BMP4P12644 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
BMP4P12644 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BMP4P12644 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BMP4P12644 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BMP4P12644 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
BMP4P12644 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 DNM1P41-201ENST00000623634 3350 ntBASIC13.11□□□□□ -0.31
BMP4P12644 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 LINC00567-201ENST00000569854 3409 ntBASIC13.11□□□□□ -0.31
BMP4P12644 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 TPM3P8-201ENST00000330554 643 ntBASIC13.11□□□□□ -0.31
BMP4P12644 ANKRD19P-201ENST00000338192 862 ntBASIC13.11□□□□□ -0.31
BMP4P12644 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.11□□□□□ -0.31
BMP4P12644 CD8B2-202ENST00000417670 633 ntBASIC13.11□□□□□ -0.31
BMP4P12644 CNN2P8-201ENST00000421872 913 ntBASIC13.11□□□□□ -0.31
BMP4P12644 ACTBP11-201ENST00000436287 1126 ntBASIC13.11□□□□□ -0.31
BMP4P12644 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 MYADML-201ENST00000474610 2147 ntBASIC13.11□□□□□ -0.31
BMP4P12644 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.11□□□□□ -0.31
BMP4P12644 RNA5SP486-201ENST00000515961 83 ntBASIC13.11□□□□□ -0.31
BMP4P12644 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.11□□□□□ -0.31
BMP4P12644 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.11□□□□□ -0.31
BMP4P12644 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.11□□□□□ -0.31
BMP4P12644 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.11□□□□□ -0.31
BMP4P12644 AL603764.1-201ENST00000636452 321 ntBASIC13.11□□□□□ -0.31
BMP4P12644 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.11□□□□□ -0.31
BMP4P12644 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BMP4P12644 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BMP4P12644 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BMP4P12644 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.11□□□□□ -0.31
BMP4P12644 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
BMP4P12644 AHCYP2-201ENST00000430630 1300 ntBASIC13.11□□□□□ -0.31
BMP4P12644 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BMP4P12644 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BMP4P12644 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 AL355102.3-201ENST00000554299 1678 ntBASIC13.1□□□□□ -0.31
BMP4P12644 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
BMP4P12644 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.1□□□□□ -0.31
BMP4P12644 ACTBP8-201ENST00000403258 1108 ntBASIC13.1□□□□□ -0.31
BMP4P12644 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.1□□□□□ -0.31
BMP4P12644 AC099336.1-201ENST00000417053 1171 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms